BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZA01RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig896 1031 0.0 >3x_Contig896 Length = 3034 Score = 1031 bits (520), Expect = 0.0 Identities = 593/612 (96%), Gaps = 4/612 (0%) Strand = Plus / Plus Query: 63 ttggaatattacaatataacgcttggtatattatattacatgggacatgttcgatgttat 122 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1497 ttggaatcttacaatataacgcttggtatattatattagatgggacatgttcgatgttat 1556 Query: 123 tcgtactcttaagatcgatttgaaattcgtttatttgggtatcaacgttgaattttatat 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1557 tcgtactcttaagatcgatttgaaattcgtttatttgggtatcaacgttgaattttatat 1616 Query: 183 tagcagcatcaaaaaatgtctgcaaggagattggtccctattgactttgagtgtctgata 242 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1617 tatcagcatcaaaaaatgtctgcaaggagattggtcccgattgactttgagtgtctgata 1676 Query: 243 gaacatgtttacttgttttggatagtatgggagagccgacattttttggttttggtaaag 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gaacatgtttacttgttttggatagtatgggagagccgacattttttggttttggtaaag 1736 Query: 303 aatttgttgccaacggaattggcgataatcgttccatctctgtgagctccgcatctatat 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 aatttgttgccaacggaattggcgataatcgttccatctctgtgagctccgcatctatat 1796 Query: 363 tctctttttgttcaggggtctcttgcacttgcactggtacctgcaatttgaccggagact 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1797 tctctttttgttcaggggtctcttgcacttgcactggtacctgcaatttgaccggagact 1856 Query: 423 gataaccaccgttagataatttccttctttttgactgcgggagttgagttggttctagtt 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1857 gataaccaccgttagataatttccttctttttgactgcgggagttgagttggttctagtt 1916 Query: 483 gagttgaagaaactatctgtgactctcgcatctccagaggagcctgctcgtttgtaaatt 542 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1917 gagttgaagaaactatctgtgactctcgcatctccagaggagcctgcacgtttgtaaatt 1976 Query: 543 ccattgttttctctgtaattgctggtattttaggtaatttgaaagc-tattctgaatttt 601 ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| | Sbjct: 1977 ccattgtttcctctgtaattgctggtatcttaggtaatttgaaagcagattctgaatctg 2036 Query: 602 catctagcgtaggttttt-tgcattcattcgtattttggtcagtttttttccatagaatc 660 |||||||||||||||||| ||||| ||| |||| ||||||||| || |||||||||| || Sbjct: 2037 catctagcgtaggtttttctgcatccatccgta-tttggtcag-ttatttccatagactc 2094 Query: 661 ttcttcgctaaa 672 ||||||| |||| Sbjct: 2095 ttcttcgttaaa 2106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7526 Number of Sequences: 1807 Number of extensions: 7526 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)