BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZA07RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1755 739 0.0 >3x_Contig1755 Length = 22936 Score = 739 bits (373), Expect = 0.0 Identities = 407/413 (98%), Gaps = 4/413 (0%) Strand = Plus / Plus Query: 56 aacatatctaagagccaaactgtctaattccatatccaactttactaagatgttcgattc 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18576 aacatatctaagagccaaactgtctaattccatatccaactttactaagatgttcgattc 18635 Query: 116 tctgtttcaattctctatttgcaacctcggcggctaacctcaaatacgtcgttcaaaact 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18636 tctgtttcaattctctatttgcaacctcggcggctaacctcaaatacgtcgttcaaaact 18695 Query: 176 cttatagatatatgacagttgaaaggctcaattgatctagtattcagctgtagtttactt 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18696 cttatagatatatgacagttgaaaggctcaattgatctagtattcagctgtagtttactt 18755 Query: 236 acaggtgttaaacgattaaacgaaaaaacagtcttgtcgttgtgccggaaagcggtagtt 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18756 acaggtgttaaacgattaaacgaaaaaacagtcttgtcgttgtgccggaaagcggtagtt 18815 Query: 296 tctttatgctatgtatgggcatggatgagcttcaatttttctgtgagttcaaaggttttt 355 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| Sbjct: 18816 tctttatgctatgtatgggcatggatgagcttcaa-ttttcggtgagttcaaagg-tttt 18873 Query: 356 ttttccttacctatcactattatgcatttttggacaaaatgcaggttttatgagaacacc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18874 ttttccttacctatcactattatgcatttttggacaaaatgcaggttttatgagaacacc 18933 Query: 416 aatgttacacacctggaaatcgtttttagacatcctatacttgtacaagtaga 468 |||||||||||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 18934 aatgttacacacctgg-aatcgtatttagacatcctatac-tgtacaagtaga 18984 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,785 Number of Sequences: 1807 Number of extensions: 15785 Number of successful extensions: 328 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)