BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZA09RM1.SCF screened BAC_end (969 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1778 1433 0.0 >3x_Contig1778 Length = 27694 Score = 1433 bits (723), Expect = 0.0 Identities = 805/824 (97%), Gaps = 7/824 (0%) Strand = Plus / Minus Query: 48 tttatcaatgcctttggttctgtcaaaaaaaa-tagtacaccgcttacacagaattatac 106 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 839 tttatcaatgcctttggttctgtcaaaaaaaaatagtacaccgcttacacagaattatac 780 Query: 107 ttgccttggcttgttcacaatatagtggtggaaatatagtattagtcttccaagaggtta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 ttgccttggcttgttcacaatatagtggtggaaatatagtattagtcttccaagaggtta 720 Query: 167 ctggttatataatttgttcatatctcatcgcatatcttttgtcaatgatttttcaaaact 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 ctggttatataatttgttcatatctcatcgcatatcttttgtcaatgatttttcaaaact 660 Query: 227 gaaaaaaaaaaacgagaagcgaagagcatcagtgagcaaagttagcttcaagaaagaaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gaaaaaaaaaaacgagaagcgaagagcatcagtgagcaaagttagcttcaagaaagaaaa 600 Query: 287 aagtgcgtggtgcggtgtaagggtttatcgattttctaccctgataatatgttagagttt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 aagtgcgtggtgcggtgtaagggtttatcgattttctaccctgataatatgttagagttt 540 Query: 347 acttcactcatacaaccaaaggaaaacgttactgagatgtgagcatcagcggaggcaatt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 acttcactcatacaaccaaaggaaaacgttactgagatgtgagcatcagcggaggcaatt 480 Query: 407 gaggctcgttgttgtaagagagaacactatttgacatactaggtactgtttagatgattg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 gaggctcgttgttgtaagagagaacactatttgacatactaggtactgtttagatgattg 420 Query: 467 ctgctgtactaagttgaaattttgaagtcaaatgaaaaaaacatgggaatttaatcacaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 ctgctgtactaagttgaaattttgaagtcaaatgaaaaaaacatgggaatttaatcacaa 360 Query: 527 caggtgtttctttaggcaattaagattttaaggtgcgcgacaattctgctcagctcaaga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 caggtgtttctttaggcaattaagattttaaggtgcgcgacaattctgctcagctcaaga 300 Query: 587 cgataaatcacacaaagaatacattgataaattgagcagtatcagattcacatcgaggaa 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgataaatcacacaaagaatacattgataaattgagcagtatcagattcacatcgaggaa 240 Query: 647 ttaagcggtattatttacttactatttcgttgtgttaaatcaaagatctatattcgtcga 706 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 239 ttaagcggtattatttacttactatttcgttgtgttaatccaaagatctatattcgtcga 180 Query: 707 acgaaagaaccacggagagaatatangtgttttaagtgtgtgcaggtcatgtcagacatt 766 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 179 acgaaagaaccacggagagaatataggtgttttaagtgtgtgcaggtcatgtcagacatt 120 Query: 767 gattngggatcttattatga-gcacttagcgtc-agacttcagaag-aatattg-aagat 822 |||| || ||||||||||| ||||| ||||| ||||| |||||| ||||||| ||||| Sbjct: 119 gatttggattcttattatgaggcactaggcgtcaagactccagaagaaatattgaaagat 60 Query: 823 tgggaaaggaccttttcgncaag-aaattc-gagacaattcaga 864 ||||||||||||| | || |||| |||||| ||||||||||||| Sbjct: 59 tgggaaaggacctctccgccaagaaaattcggagacaattcaga 16 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,937 Number of Sequences: 1807 Number of extensions: 12937 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 969 length of database: 10,358,551 effective HSP length: 16 effective length of query: 953 effective length of database: 10,329,639 effective search space: 9844145967 effective search space used: 9844145967 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)