BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZA10FM1.SCF screened BAC_end (997 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1517 599 e-171 3x_Contig38 170 3e-42 >3x_Contig1517 Length = 8289 Score = 599 bits (302), Expect = e-171 Identities = 343/350 (98%), Gaps = 5/350 (1%) Strand = Plus / Minus Query: 88 tgggtaaaatggtaccaacagcatagtccaaaattagatgaagtagatatgaatgttgag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tgggtaaaatggtaccaacagcatagtccaaaattagatgaagtagatatgaatgttgag 4548 Query: 148 actgcagcagattccagagttgatctggcaccgaatctcatgcatagaaatgatgagttt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4547 actgcagcagattccagagttgatctggcaccgaatctcatgcatagaaatgatgagttt 4488 Query: 208 gatcacaatgcggacatggacattgacatggatctcgatacagatccgtacgcggatgca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4487 gatcacaatgcggacatggacattgacatggatctcgatacagatccgtacgcggatgca 4428 Query: 268 gacatggacatagagctggatgaatagtccttagacatgtttgtgaagtattattatcat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4427 gacatggacatagagctggatgaatagtccttagacatgtttgtgaagtattattatcat 4368 Query: 328 tttgatagaagtattaacacctatagagagagtatgtaaaacaactgatttttaacttgt 387 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 4367 tttgatagaagtattaacacctatagagagagtatgt-aaacaactgattttt-acttgt 4310 Query: 388 tgaacttgatttaatgtgaaagaatattaagagtgtttaatgccaaaatt 437 ||||| ||| |||||||||||||||| |||||||| |||||| ||||||| Sbjct: 4309 tgaac-tgaattaatgtgaaagaata-taagagtg-ttaatgtcaaaatt 4263 >3x_Contig38 Length = 925 Score = 170 bits (86), Expect = 3e-42 Identities = 86/86 (100%) Strand = Plus / Minus Query: 88 tgggtaaaatggtaccaacagcatagtccaaaattagatgaagtagatatgaatgttgag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 tgggtaaaatggtaccaacagcatagtccaaaattagatgaagtagatatgaatgttgag 31 Query: 148 actgcagcagattccagagttgatct 173 |||||||||||||||||||||||||| Sbjct: 30 actgcagcagattccagagttgatct 5 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 36,273 Number of Sequences: 1807 Number of extensions: 36273 Number of successful extensions: 438 Number of sequences better than 1.0e-20: 2 length of query: 997 length of database: 10,358,551 effective HSP length: 16 effective length of query: 981 effective length of database: 10,329,639 effective search space: 10133375859 effective search space used: 10133375859 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)