BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZB07FM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1278 928 0.0 >3x_Contig1278 Length = 6932 Score = 928 bits (468), Expect = 0.0 Identities = 525/540 (97%), Gaps = 3/540 (0%) Strand = Plus / Plus Query: 86 attaccaatgtgcgatgagattcaaatgctagacaaattcacacagctatgagacaactt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4795 attaccaatgtgcgatgagattcaaatgctagacaaattcacacagctatgagacaactt 4854 Query: 146 aagttcgccaccgtatgacatgatctcgaagaccgaaaactagaaaattaattcactatg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4855 aagttcgccaccgtatgacatgatctcgaagaccgaaaactagaaaattaattcactatg 4914 Query: 206 gggaagtttggactaccttaaactttattcattaaaatcttaggaaatcgttcaggacta 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4915 gggaagtttggactaccttaaactttattcattaaaatcttaggaaatcgttcaggacta 4974 Query: 266 atcttctaaagtagtatggtattgttttaattatagctttttcagtatatctgaaatagt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4975 atcttctaaagtagtatggtattgttttaattatagctttttcagtatatctgaaatagt 5034 Query: 326 aaatattaatgaagatgcatatatagacgaattgaaaaaaggtactaacgacgtggggat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5035 aaatattaatgaagatgcatatatagacgaattgaaaaaaggtactaacgacgtggggat 5094 Query: 386 atgaaagcattaggaatgaacgttaataatcgtggtattgtaaagtgatgaaggaactga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5095 atgaaagcattaggaatgaacgttaataatcgtggtattgtaaagtgatgaaggaactga 5154 Query: 446 aac-atgaaggttgcattatttttcggtttgaaga-aaatcttcaagctgcaaatgtgaa 503 ||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5155 aacaatgaagtttgcattatttttcggtttgaagagaaatcttcaagctgcaaatgtgaa 5214 Query: 504 agtaaatactcaaaagatggattcttttataggatctggtaacctattacaacaattga- 562 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || Sbjct: 5215 agtaaatactcaaaagatggattcttttatagtatctgttaacctattacaacaatagag 5274 Query: 563 cagcgatggggggcaaaccaccacccgcaccgaaagtgaccttgccaccgttgttgccgg 622 ||||||||| || | |||| |||| |||||||| |||||||||||| |||||||||||| Sbjct: 5275 cagcgatggcggcgataccagcaccggcaccgaaggtgaccttgccagcgttgttgccgg 5334 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6891 Number of Sequences: 1807 Number of extensions: 6891 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)