BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZB08FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1136 1130 0.0 >3x_Contig1136 Length = 5035 Score = 1130 bits (570), Expect = 0.0 Identities = 614/625 (98%), Gaps = 3/625 (0%) Strand = Plus / Plus Query: 87 tggtcatgaccccaacctcgttcaattatgttattgtctcccaccaacaggaaacgacga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1771 tggtcatgaccccaacctcgttcaattatgttattgtctcccaccaacaggaaacgacga 1830 Query: 147 tgcagcaaattatttcacttcacaccctgtcttcaagcatttgacgttcattggtagtaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1831 tgcagcaaattatttcacttcacaccctgtcttcaagcatttgacgttcattggtagtaa 1890 Query: 207 acctgtcgcacatcacgttttgaaggctgctgcagattctttaaccccagttgttgttga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891 acctgtcgcacatcacgttttgaaggctgctgcagattctttaaccccagttgttgttga 1950 Query: 267 attgggtggtaaagatgctttcattgttttggattccgtaaaggacttacaagctctctc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951 attgggtggtaaagatgctttcattgttttggattccgtaaaggacttacaagctctctc 2010 Query: 327 ttcgattattatgcgtggtactttccaatcggctggtcaaaattgtatcggtatcgagag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 ttcgattattatgcgtggtactttccaatcggctggtcaaaattgtatcggtatcgagag 2070 Query: 387 agttatagtttctgccaagaattatgatgcattagtctctattctcaacgatagagtagg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 agttatagtttctgccaagaattatgatgcattagtctctattctcaacgatagagtagg 2130 Query: 447 gcaattgaggttgggatctgatattgataatttagaagatgtcgatatgggtgcaatgat 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2131 gcaattgaggttgggatctgatattgataatttagaagatgtcgatatgggtgcaatgat 2190 Query: 507 ttccgacaatagatttggtcaattagaaaatctaatatctgatgcgttgtcaaaaggtgc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2191 ttccgacaatagatttggtcaattagaaaatctaatatctgatgcgttgtcaaaaggtgc 2250 Query: 567 caagttattgcatgggggtttctcgttacaatcatccaaactatccttaaggtcactttt 626 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 2251 caagttattgcatggggg-ttctcgttacaatcatccaaactatcctcaaggtcactttt 2309 Query: 627 tccaacccacgctttttggtggatgttactggagatatgcanatcttgcacaatgtaata 686 |||||||||||| |||||||||||||||||| ||||||||| |||| |||||||| | || Sbjct: 2310 tccaacccacgc-ttttggtggatgttactgaagatatgcagatctcgcacaatgaagta 2368 Query: 687 tttcgacccaattctaactgttatg 711 |||| |||||||||||||||||| Sbjct: 2369 -ttcggaccaattctaactgttatg 2392 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5847 Number of Sequences: 1807 Number of extensions: 5847 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)