BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZC07FM1.SCF screened BAC_end (993 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1571 666 0.0 >3x_Contig1571 Length = 13536 Score = 666 bits (336), Expect = 0.0 Identities = 368/376 (97%), Gaps = 2/376 (0%) Strand = Plus / Plus Query: 89 gtggaaagagagcgagggattacaatcaaagcacagacatgctccatgttttaccaggat 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 gtggaaagagagcgagggattacaatcaaagcacagacatgctccatgttttaccaggat 704 Query: 149 cctagaacgaaattggactatctcttacatttagtggatacaccgggccatgtggatttt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 cctagaacgaaattggactatctcttacatttagtggatacaccgggccatgtggatttt 764 Query: 209 cgtgctgaagtttcaagatcgtatgcatcgtgtggtggcgctttgttactcgttgacgct 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cgtgctgaagtttcaagatcgtatgcatcgtgtggtggcgctttgttactcgttgacgct 824 Query: 269 tcccaaggtgttcaagcacagacagtctcaaacttttacctcgcttatagtatggatttg 328 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 825 tcccaaggtgttcaagcacagacagtcgcaaacttttacctcgcttatagtatggatttg 884 Query: 329 aaacttattcctgtcataaacaagattgacttggacattgctgacattgaccaagcagaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 aaacttattcctgtcataaacaagattgacttggacattgctgacattgaccaagcagaa 944 Query: 389 taacaggttgaaaatatgttcgagctacctaagtcatattgcatcaaaagttattgctaa 448 ||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||| Sbjct: 945 gaacaggttgaaaatatgttcgagctacctaagtcagattgtatc-aaagttagtgctaa 1003 Query: 449 tacttggattgcacgt 464 || |||||||||||| Sbjct: 1004 aac-tggattgcacgt 1018 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8273 Number of Sequences: 1807 Number of extensions: 8273 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 993 length of database: 10,358,551 effective HSP length: 16 effective length of query: 977 effective length of database: 10,329,639 effective search space: 10092057303 effective search space used: 10092057303 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)