BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZC08RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1319 1485 0.0 >3x_Contig1319 Length = 7600 Score = 1485 bits (749), Expect = 0.0 Identities = 842/863 (97%), Gaps = 8/863 (0%) Strand = Plus / Plus Query: 48 aaatataggtatccaaacacagaagttggcaaccatttatcaagtgacactgtcgaaatc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3863 aaatataggtatccaaacacagaagttggcaaccatttatcaagtgacactgtcgaaatc 3922 Query: 108 ggcaaagaggaaatcttgttgggaaatctacctgatttgaacaatgggttaatattagag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3923 ggcaaagaggaaatcttgttgggaaatctacctgatttgaacaatgggttaatattagag 3982 Query: 168 tacagagggggtactaaatgctgggatggtcctttaagatccgccacaattcaaatgaga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3983 tacagagggggtactaaatgctgggatggtcctttaagatccgccacaattcaaatgaga 4042 Query: 228 tgtgcaccggatttcaaaatcgagtcggtttcagaaccaacgagatgttcttacgtattt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4043 tgtgcaccggatttcaaaatcgagtcggtttcagaaccaacgagatgttcttacgtattt 4102 Query: 288 gaaatgacaggaccattaggatgcgatcctcatttccattatgaaagaccaaactggcta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4103 gaaatgacaggaccattaggatgcgatcctcatttccattatgaaagaccaaactggcta 4162 Query: 348 atataacgaatgaatcagggctgattattctctgtggctgtaacacctcatctatctact 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4163 atataacgaatgaatcagggctgattattctctgtggctgtaacacctcatctatctact 4222 Query: 408 aattcctagtccaaatacaggctatataataaacgcttttttcctcgctgtgtgtgcgcg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4223 aattcctagtccaaatacaggctatataataaacgcttttttcctcgctgtgtgtgcgcg 4282 Query: 468 cttgaacgtaatcatatgccggaataagctttttaacttttttaaattttttttgtaccc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4283 cttgaacgtaatcatatgccggaataagctttttaacttttttaaattttttttgtaccc 4342 Query: 528 ctcggtacctgcatgcctttctgccgcaatatctgcactaaacgacataaaaggaagaag 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4343 ctcggtacctgcatgcctttctgccgcaatatctgcactaaacgacataaaaggaagaag 4402 Query: 588 accgttttttgtggcaagtacgacgaaacaagtgaaaaggcattaggtaactaagggaac 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4403 accgttttttgtggcaagtacgacgaaacaagtgaaaaggcattaggtaactaagggaac 4462 Query: 648 tnggtcaattcgtatagtaagtcatgctctagaagatttacgggctgctgngaatgtcaa 707 | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4463 tgggtcaattcgtatagtaagtcatgctctagaagatttacgggctgctggaaatgtcaa 4522 Query: 708 cattctagaacttcgccgcagtccccaaaaaaaaaggcgtaatggntatttgaagaagaa 767 ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 4523 cattctagaacttcgccgcagtcccaaaaaaaaaaggcgtaatgg-taattgaagaagaa 4581 Query: 768 aatcttctttggagatcccttgtacgccaggatgggacaagaacttttagggatttggag 827 ||||||| |||||||||||||||||| |||||| |||||||||| |||| ||| |||||| Sbjct: 4582 aatcttc-ttggagatcccttgtacg-caggattggacaagaac-tttaaggaattggag 4638 Query: 828 ctgccctatttttcctttttttttaccctctaaggggcttggaaaatcagggtactggga 887 ||| ||||||||||||||||||| | |||||||| ||| ||| ||||||| |||||| || Sbjct: 4639 ctg-cctatttttccttttttttca-cctctaagtggcatgg-aaatcagtgtactgtga 4695 Query: 888 gctattttcattacgtgcaaacg 910 |||| |||||||||||||||||| Sbjct: 4696 gcta-tttcattacgtgcaaacg 4717 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7612 Number of Sequences: 1807 Number of extensions: 7612 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)