BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZC11RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1502 1289 0.0 >3x_Contig1502 Length = 14970 Score = 1289 bits (650), Expect = 0.0 Identities = 722/745 (96%), Gaps = 1/745 (0%) Strand = Plus / Minus Query: 48 ttaatgcgttgaagttagcctcaacaattctaggatcggattcatccaacgatagaatag 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11654 ttaatgcgttgaagttagcctcaacaattctaggatcggattcatccaacgatagaatag 11595 Query: 108 catttgtagcgatatccgatgtatagatgttgtagtccaacgtagtgttgtcaaagaatg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11594 catttgtagcgatatccgatgtatagatgttgtagtccaacgtagtgttgtcaaagaatg 11535 Query: 168 ttggaagacgctccaaaactacaattctcttagctacatcttcgtgctttaatagtgaca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11534 ttggaagacgctccaaaactacaattctcttagctacatcttcgtgctttaatagtgaca 11475 Query: 228 taatttgttgcaagagtggatgtaaaccttcataatctgttattgacaagaaaatcttgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11474 taatttgttgcaagagtggatgtaaaccttcataatctgttattgacaagaaaatcttgt 11415 Query: 288 ccaaagtagattcaagggagtgttttgtttcagtgttatctgtttctatcaaagcattga 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11414 ccaaagtagattcaagggagtgttttgtttcagtgttatctgtttctatcaaagcattga 11355 Query: 348 caactgaattgattattgtcgaggtacgtttgtacaatgcaggtccagctacctcagcta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11354 caactgaattgattattgtcgaggtacgtttgtacaatgcaggtccagctacctcagcta 11295 Query: 408 atgaacccaatgcgtttgccttgaaagcatcgataggaggagtcaaaagagttggaatta 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11294 atgaacccaatgcgtttgccttgaaagcatcgataggaggagtcaaaagagttggaatta 11235 Query: 468 aaatagggaaaatcacttctgatttagtagacatgatttcttgcaaagcagataaggcgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11234 aaatagggaaaatcacttctgatttagtagacatgatttcttgcaaagcagataaggcgt 11175 Query: 528 attgtgagttttcttcttccttcaatttgntcaacaagaatggtataatttcatcaattg 587 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11174 attgtgagttttcttcttccttcaatttgttcaacaagaatggtataatttcatcaattg 11115 Query: 588 c-accttacccataacttcttgatatgcattgaaacaagttgctgccgcttttttgacag 646 | |||||||||||||||||||||||||||| |||||||||||||||||||| | |||| | Sbjct: 11114 caaccttacccataacttcttgatatgcatcgaaacaagttgctgccgcttctctgacgg 11055 Query: 647 tttcatcttcattaatgacaggtgaacagaaaatgtcaacgattacagattggaatgcct 706 |||||||| ||| |||||||| ||||||| |||||||||||| |||||||||||||||| Sbjct: 11054 tttcatctccatcaatgacagtagaacagataatgtcaacgataacagattggaatgcct 10995 Query: 707 ccaaggggttcctacttgaggaaacaattaattcatgtagagcgattcaaacaccttgtt 766 |||||| || ||||| |||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 10994 ccaaggagtcactactagaggaaacaattaattcatgaagagcgatacaaacaccttgct 10935 Query: 767 taaaattggaatcaatggaagtatc 791 || | ||||||||||| || ||||| Sbjct: 10934 tagagttggaatcaattgaggtatc 10910 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7867 Number of Sequences: 1807 Number of extensions: 7867 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)