BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZD05FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1534 1084 0.0 >3x_Contig1534 Length = 9979 Score = 1084 bits (547), Expect = 0.0 Identities = 686/718 (95%), Gaps = 11/718 (1%) Strand = Plus / Minus Query: 83 cttctggtggtaaatcaacgataaggaaaccattgacaccagcagcaccagcatccttaa 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3396 cttctggtggtaaatcaacgataaggaaaccattgacaccagcagcaccagcatccttaa 3337 Query: 143 tgaatttctcttcaccgtagtttaagataggattatagtaacccatcaatacaattggta 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3336 tgaatttctcttcaccgtagtttaagataggattatagtaacccatcaatacaattggta 3277 Query: 203 cggtgataccttcttctcttgcttgcttaactagagccaaaacttttggcatatcgatac 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3276 cggtgataccttcttctcttgcttgcttaactagagccaaaacttttggcatatcgatac 3217 Query: 263 cgttcttcaatgcaacagtattggcaatttgaatcactggaccatcagcaactggatcag 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3216 cgttcttcaatgcaacagtattggcaatttgaatcactggaccatcagcaactggatcag 3157 Query: 323 aaaatggtaagcctaactcaataacatcaacaccaccgtcttggaaacccttcatgattt 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3156 aaaatggtaagcctaactcaataacatcaacaccaccgtcttggaaacccttcatgattt 3097 Query: 383 gaatggtatcctctagggttggatatccagcagtcataaaagtgacaagggcattgcggc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3096 gaatggtatcctctagggttggatatccagcagtcataaaagtgacaagggcattgcggc 3037 Query: 443 cttctttcttagcgttttcaaacgcttgtctcaacaacacagacatgtttctttagatca 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3036 cttctttcttagcgttttcaaacgcttgtctcaacaacacagacatgtttctttagatca 2977 Query: 503 atgttgagcttgagatttgataagtggtanaaagatgatagaacaaactttaatcacgct 562 ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| Sbjct: 2976 atgttgagcttgagatttgataagtggtaaaagaatgatagaacaaacttaaatcacgct 2917 Query: 563 tatggattgcatttctcttctgtaaatgagtgtatgtgcgatata-atgtgaagagtact 621 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2916 aatggattgcatttctcttctgtaaatgagtgtatgtgcgatatatatgtgaagagtac- 2858 Query: 622 ttcttttcg-atcga-ttttttttcaccacgaaattaa-tgcagatgactc-aagttagg 677 ||||||||| ||||| ||||||||||| |||||||||| |||||||||||| |||| ||| Sbjct: 2857 ttcttttcgaatcgatttttttttcacaacgaaattaagtgcagatgactcaaagtaagg 2798 Query: 678 ctagg-agattaattgtagattgattaaca-aagttca-gccccatgcccgcggaactgg 734 ||||| |||||||| |||||| || ||||| | || || || | |||| ||||| ||||| Sbjct: 2797 ctaggaagattaatagtagatgga-taacagaggtacaggcacgatgcgcgcggtactgg 2739 Query: 735 cttataatcaatttgatttaccaatttg-taaacccgaaatttacttgaataccatga 791 ||||||||||||||||| |||||||||| |||||| |||| | ||||||||| |||| Sbjct: 2738 cttataatcaatttgatataccaatttgataaaccagaaactagcttgaatacgatga 2681 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7390 Number of Sequences: 1807 Number of extensions: 7390 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)