BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZD07RM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1803 1451 0.0 >3x_Contig1803 Length = 52241 Score = 1451 bits (732), Expect = 0.0 Identities = 820/843 (97%), Gaps = 7/843 (0%) Strand = Plus / Minus Query: 46 tagaaattgattacattgacgaaagtgaggttttgactcctgctgactggaaaggacata 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32707 tagaaattgattacattgacgaaagtgaggttttgactcctgctgactggaaaggacata 32648 Query: 106 tcaagaagaacgatttcaatgtaccatttgtttgcggtgcaaaagatctcggtgaagcac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32647 tcaagaagaacgatttcaatgtaccatttgtttgcggtgcaaaagatctcggtgaagcac 32588 Query: 166 ttagaagaatagaagaaggtgcagcaatgatccgtaccaagggtgaagctggtactggtg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32587 ttagaagaatagaagaaggtgcagcaatgatccgtaccaagggtgaagctggtactggtg 32528 Query: 226 atgtttctgaagcagttaagcatatcaaaaagattaaatctgaaattaaggaatatcaag 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32527 atgtttctgaagcagttaagcatatcaaaaagattaaatctgaaattaaggaatatcaag 32468 Query: 286 atactctcggtgatgacacagatttcattaagcaacgcgctgaatctattggtgtttctt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32467 atactctcggtgatgacacagatttcattaagcaacgcgctgaatctattggtgtttctt 32408 Query: 346 atgagttactaaagtatgttttggataacgggaagttaccagttgtgaactttgctgccg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32407 atgagttactaaagtatgttttggataacgggaagttaccagttgtgaactttgctgccg 32348 Query: 406 gtggtgttgccactcctgccgatgccgctttattaatgcaatt--gggttgtgaaggtgt 463 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 32347 gtggtgttgccactcctgccgatgccgctttattaatgcaattgcgggttgtgaaggtgt 32288 Query: 464 atttgtcgggtcaggtatcttcaaatcttctgacccagaaaagctagctcgtgcaattgt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32287 atttgtcgggtcaggtatcttcaaatcttctgacccagaaaagctagctcgtgcaattgt 32228 Query: 524 ggaagctactacccattacgatgatgcagaaactttgttgaaagtgtcaactgatttggg 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32227 ggaagctactacccattacgatgatgcagaaactttgttgaaagtgtcaactgatttggg 32168 Query: 584 tgacctaatgggtggattgtcaatagaatccttgaagaactccgannacccttanaggtt 643 ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| Sbjct: 32167 tgacctaatgggtggattgtcaatagaatccttgaagaactccgaaaaccctaaaaggtt 32108 Query: 644 ggcaaacatcggctggtagttacgaaacagtatacagcgataggtatttttacatattca 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32107 ggcaaacatcggctggtagttacgaaacagtatacagcgataggtatttttacatattca 32048 Query: 704 agttaagacgaaccanagtttatatttgattttataatgctgnctttgtt-acaacttat 762 ||| ||||||||| | |||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 32047 agtaaagacgaacaaaagtttata-ttgattttataatgctg-ctttgttaacaacttat 31990 Query: 763 taaacaagagagtatcagcttttacatttaggagtcacaacctgatttacgagagaagct 822 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 31989 caaacaagagagtatcagctttacaatttaggagtcacaacctgattaacgagagaagct 31930 Query: 823 gtttaccatttttcaggcaaatactt-attacgattacgaattgcgt-aaataccaagga 880 || ||||||||||||||||||||||| || ||||| ||||||||||| |||||| ||||| Sbjct: 31929 gtataccatttttcaggcaaatacttaataacgataacgaattgcgtaaaatacaaagga 31870 Query: 881 ata 883 ||| Sbjct: 31869 ata 31867 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6400 Number of Sequences: 1807 Number of extensions: 6400 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)