BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZE03RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1413 1633 0.0 >3x_Contig1413 Length = 8782 Score = 1633 bits (824), Expect = 0.0 Identities = 876/887 (98%), Gaps = 5/887 (0%) Strand = Plus / Plus Query: 47 aaggtatcgttttc-cacaattgaagactaccgatccatcatcactgtcttcaacgctaa 105 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4512 aaggtatcgttttcacacaattgaagactaccgatccatcatcactgtcttcaacgctaa 4571 Query: 106 ttaaatcagcaaattggaactcgttcgcggaattattaggctggatgagtgaaaaaaagt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4572 ttaaatcagcaaattggaactcgttcgcggaattattaggctggatgagtgaaaaaaagt 4631 Query: 166 ttatctctgtcagtgataaatttatagcagatctcgaaaaaatccctcccaaagttcccc 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4632 ttatctctgtcagtgataaatttatagcagatctcgaaaaaatccctcccaaagttcccc 4691 Query: 226 gtgatcaagagccctctgtgcaccttttaatcctaggaatgcgttatttgaggcttaaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4692 gtgatcaagagccctctgtgcaccttttaatcctaggaatgcgttatttgaggcttaaaa 4751 Query: 286 actatcctctagaaatgtttgaggaaagtgcagggttcatcaaatctatttcgaagttct 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4752 actatcctctagaaatgtttgaggaaagtgcagggttcatcaaatctatttcgaagttct 4811 Query: 346 ttgctccgtcccaaaacacttctattcgtttggcttatgctgaagtactaagtcaacttt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4812 ttgctccgtcccaaaacacttctattcgtttggcttatgctgaagtactaagtcaacttt 4871 Query: 406 tattgccgttggctggagcaatgacagcagaggctaatcatccaacgtggatagaagcaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4872 tattgccgttggctggagcaatgacagcagaggctaatcatccaacgtggatagaagcaa 4931 Query: 466 tgacgtcgatcctagctacctgtaaaaaacttcaaactgacagcaaatgctggacacttg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4932 tgacgtcgatcctagctacctgtaaaaaacttcaaactgacagcaaatgctggacacttg 4991 Query: 526 ctttcaagttgaccgtggcagtgttgtgtgtctcagatactgaattgttttccaaaaact 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4992 ctttcaagttgaccgtggcagtgttgtgtgtctcagatactgaattgttttccaaaaact 5051 Query: 586 ggttatctttgatcgagaagaacgttaccaaaattaaatctaagtcattagaagatcgtg 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5052 ggttatctttgatcgagaagaacgttaccaaaattaaatctaagtcattagaagatcgtg 5111 Query: 646 ttgctttctccatgggcctttcaaggttgatatgggtctatcttttcagatgtactgaaa 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5112 ttgctttctccatgggcctttcaaggttgatatgggtctatcttttcagatgtactgaaa 5171 Query: 706 ccttaaacaatacagacaaaacgttgacaaaattgttctcgttatttttgagttcaaaga 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5172 ccttaaacaatacagacaaaacgttgacaaaattgttctcgttatttttgagttcaaaga 5231 Query: 766 agaaagagaactggatcacgacagatatggatatcataaaccctctatgtgatgttttcg 825 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5232 agaaggagaactggatcacgacagatatggatatcataaaccctctatgtgatgttttcg 5291 Query: 826 tgactgggggatacgttcatcctacccttcgtattggaaaatgtttcttctacatttgat 885 |||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||| Sbjct: 5292 tgactgtgggatacgttcatccta-ccttcgtatttgaaaatg-ttcttctacatttgat 5349 Query: 886 gaaaatctcctttnatggggacgaaatttagagaatattgcacatga 932 |||| ||||||| || |||||| ||||||||||||||||||||||| Sbjct: 5350 gaaatcctcctttaat-gggacg-aatttagagaatattgcacatga 5394 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6711 Number of Sequences: 1807 Number of extensions: 6711 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)