BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZE05RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1693 1582 0.0 >3x_Contig1693 Length = 15531 Score = 1582 bits (798), Expect = 0.0 Identities = 858/871 (98%), Gaps = 6/871 (0%) Strand = Plus / Minus Query: 46 cgctagagcatatggcagatgtgtcaagaagtgaaggtaatttccttcatttactaaaca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11149 cgctagagcatatggcagatgtgtcaagaagtgaaggtaatttccttcatttactaaaca 11090 Query: 106 tcatccacgacaaatattaattacctttgatagactgtataaaacctcgtttaatgacaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11089 tcatccacgacaaatattaattacctttgatagactgtataaaacctcgtttaatgacaa 11030 Query: 166 ccaagtaattctttaatatgtcaccaattacagtgtctgttgtatgtaaccgatgttacg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11029 ccaagtaattctttaatatgtcaccaattacagtgtctgttgtatgtaaccgatgttacg 10970 Query: 226 ataatgcgtttcttagcgtatttggctttatggatttgtataaaggttttgtcacgtgac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10969 ataatgcgtttcttagcgtatttggctttatggatttgtataaaggttttgtcacgtgac 10910 Query: 286 catttggtattattctaataattatttctttttgaggctgaaatttttacatgaacgatg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10909 catttggtattattctaataattatttctttttgaggctgaaatttttacatgaacgatg 10850 Query: 346 cgatgagatgagacgttagagctgaagaacaacttagctggttggacatttttgtttacg 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10849 cgatgagatgagacgttagagctgaagaacaacttagctggttggacatttttgtttacg 10790 Query: 406 acggactagtatcgtgtatatacgtactgtagtcactataaacaggcattattatagtat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10789 acggactagtatcgtgtatatacgtactgtagtcactataaacaggcattattatagtat 10730 Query: 466 attatcagctattcgcttttttggtactatacaagcaacacattattgaagtacgatgtt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10729 attatcagctattcgcttttttggtactatacaagcaacacattattgaagtacgatgtt 10670 Query: 526 aagaaggcaagctcgtgaaagaagagaatacttgtaccgtaaagcacaagagctacaaga 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10669 aagaaggcaagctcgtgaaagaagagaatacttgtaccgtaaagcacaagagctacaaga 10610 Query: 586 atctcaactacaacaaaagcgccaaatcataaagcaagcgttagcacaggggaaaccact 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10609 atctcaactacaacaaaagcgccaaatcataaagcaagcgttagcacaggggaaaccact 10550 Query: 646 accaaaggaaattgctgaagatgagcaactacagaaagattttcaatacgatgaaagtgc 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10549 accaaaggaaattgctgaagatgagcaactacagaaagattttcaatacgatgaaagtgc 10490 Query: 706 tcangaacagatagatgatgagtacagcgcaacaagcggtatcgcagaacctaagattat 765 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10489 tcaggaacagatagatgatgagtacagcgcaacaagcggtatcgcagaacctaagattat 10430 Query: 766 tgtgancacatctagagaccctagtactaggttatcacagtttgcaaaagaaatc-aatt 824 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10429 tgtgacaacatctagagaccctagtactaggttatcacagtttgcaaaagaaatcaaatt 10370 Query: 825 actgttccc-acagacgttagatt-aacagaggtnattaca-tatgccgaatcttgtcga 881 ||||||||| |||| || ||||| ||||||||| |||||| |||||||||||||||||| Sbjct: 10369 actgttcccaacagcggtaagattaaacagaggtaattacattatgccgaatcttgtcga 10310 Query: 882 tgcctgtc-aacatca-gaacgtcagatttg 910 |||||||| ||||||| |||||||||||||| Sbjct: 10309 tgcctgtcaaacatcaggaacgtcagatttg 10279 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7054 Number of Sequences: 1807 Number of extensions: 7054 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)