BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC46ZE05RM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1693                                                        1582   0.0  

>3x_Contig1693 
          Length = 15531

 Score = 1582 bits (798), Expect = 0.0
 Identities = 858/871 (98%), Gaps = 6/871 (0%)
 Strand = Plus / Minus

                                                                         
Query: 46    cgctagagcatatggcagatgtgtcaagaagtgaaggtaatttccttcatttactaaaca 105
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11149 cgctagagcatatggcagatgtgtcaagaagtgaaggtaatttccttcatttactaaaca 11090

                                                                         
Query: 106   tcatccacgacaaatattaattacctttgatagactgtataaaacctcgtttaatgacaa 165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11089 tcatccacgacaaatattaattacctttgatagactgtataaaacctcgtttaatgacaa 11030

                                                                         
Query: 166   ccaagtaattctttaatatgtcaccaattacagtgtctgttgtatgtaaccgatgttacg 225
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11029 ccaagtaattctttaatatgtcaccaattacagtgtctgttgtatgtaaccgatgttacg 10970

                                                                         
Query: 226   ataatgcgtttcttagcgtatttggctttatggatttgtataaaggttttgtcacgtgac 285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10969 ataatgcgtttcttagcgtatttggctttatggatttgtataaaggttttgtcacgtgac 10910

                                                                         
Query: 286   catttggtattattctaataattatttctttttgaggctgaaatttttacatgaacgatg 345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10909 catttggtattattctaataattatttctttttgaggctgaaatttttacatgaacgatg 10850

                                                                         
Query: 346   cgatgagatgagacgttagagctgaagaacaacttagctggttggacatttttgtttacg 405
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10849 cgatgagatgagacgttagagctgaagaacaacttagctggttggacatttttgtttacg 10790

                                                                         
Query: 406   acggactagtatcgtgtatatacgtactgtagtcactataaacaggcattattatagtat 465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10789 acggactagtatcgtgtatatacgtactgtagtcactataaacaggcattattatagtat 10730

                                                                         
Query: 466   attatcagctattcgcttttttggtactatacaagcaacacattattgaagtacgatgtt 525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10729 attatcagctattcgcttttttggtactatacaagcaacacattattgaagtacgatgtt 10670

                                                                         
Query: 526   aagaaggcaagctcgtgaaagaagagaatacttgtaccgtaaagcacaagagctacaaga 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10669 aagaaggcaagctcgtgaaagaagagaatacttgtaccgtaaagcacaagagctacaaga 10610

                                                                         
Query: 586   atctcaactacaacaaaagcgccaaatcataaagcaagcgttagcacaggggaaaccact 645
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10609 atctcaactacaacaaaagcgccaaatcataaagcaagcgttagcacaggggaaaccact 10550

                                                                         
Query: 646   accaaaggaaattgctgaagatgagcaactacagaaagattttcaatacgatgaaagtgc 705
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10549 accaaaggaaattgctgaagatgagcaactacagaaagattttcaatacgatgaaagtgc 10490

                                                                         
Query: 706   tcangaacagatagatgatgagtacagcgcaacaagcggtatcgcagaacctaagattat 765
             ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10489 tcaggaacagatagatgatgagtacagcgcaacaagcggtatcgcagaacctaagattat 10430

                                                                         
Query: 766   tgtgancacatctagagaccctagtactaggttatcacagtttgcaaaagaaatc-aatt 824
             |||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10429 tgtgacaacatctagagaccctagtactaggttatcacagtttgcaaaagaaatcaaatt 10370

                                                                         
Query: 825   actgttccc-acagacgttagatt-aacagaggtnattaca-tatgccgaatcttgtcga 881
             ||||||||| ||||  || ||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 10369 actgttcccaacagcggtaagattaaacagaggtaattacattatgccgaatcttgtcga 10310

                                            
Query: 882   tgcctgtc-aacatca-gaacgtcagatttg 910
             |||||||| ||||||| ||||||||||||||
Sbjct: 10309 tgcctgtcaaacatcaggaacgtcagatttg 10279


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7054
Number of Sequences: 1807
Number of extensions: 7054
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)