BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZE08RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1273 0.0 >3x_Contig1801 Length = 57606 Score = 1273 bits (642), Expect = 0.0 Identities = 704/721 (97%), Gaps = 3/721 (0%) Strand = Plus / Plus Query: 49 tgtattgccattggtgagagatggacaatttcaagaactactgctcaagacattcaaatt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39849 tgtattgccattggtgagagatggacaatttcaagaactactgctcaagacattcaaatt 39908 Query: 109 agattcccaccaaccgacgttgtggcttctgtcgcggagccagttccaaccttgctttca 168 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 39909 agattcccaccaaccgacgttgtggcttctgtcgcggagc-agttccaaccttgctttca 39967 Query: 169 gtgagatgtcctcaggtagataacattgccaatttgcttaaacactgcaaaaagaacgaa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39968 gtgagatgtcctcaggtagataacattgccaatttgcttaaacactgcaaaaagaacgaa 40027 Query: 229 gtgatttt-aacctcaagcaacaacatgtcaaattctgcaacacagctgaccttggggtc 287 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40028 gtgatttttaacctcaagcaacaacatgtcaaattctgcaacacagctgaccttggggtc 40087 Query: 288 caattcatcatcaattttgagtaataacgtttcaaatatgtcatttagcaggtccagtac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40088 caattcatcatcaattttgagtaataacgtttcaaatatgtcatttagcaggtccagtac 40147 Query: 348 tgcttcgaacgatttatcacatggttggtcgaaaccgcaagtactagattccagtaaaga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40148 tgcttcgaacgatttatcacatggttggtcgaaaccgcaagtactagattccagtaaaga 40207 Query: 408 ttgtaaatcactgctgttattatcaaaaattaaggtgcgattacataaatatgaccagca 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40208 ttgtaaatcactgctgttattatcaaaaattaaggtgcgattacataaatatgaccagca 40267 Query: 468 atacggatggaagatgactaaagttggattgttgaatgtttactctagagaatataatgg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40268 atacggatggaagatgactaaagttggattgttgaatgtttactctagagaatataatgg 40327 Query: 528 atcagttgctggatgtanatttgagatggatgacaccgagtcgttcatttcatccatatc 587 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 40328 atcagttgctggatgtaaatttgagatggatgacaccgagtcgttcatttcatccatatc 40387 Query: 588 ggacctgaagagaattggaaggactggtatctcagctggagaacgtctagtagagttcaa 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40388 ggacctgaagagaattggaaggactggtatctcagctggagaacgtctagtagagttcaa 40447 Query: 648 aaatc-aaatgtagctgacgagacctataaattgcttagtgctcttgtaatacgaaccac 706 ||||| |||||||||||||||||||||||||||||| ||||||| |||||||| ||| Sbjct: 40448 aaatcaaaatgtagctgacgagacctataaattgctaggtgctctgtaaatacgaaacac 40507 Query: 707 ttgggatgtgtctgaatattacctttggaatcccaaacttttaattaaaaacttttttta 766 ||| ||||||||||||||||||||||| | ||||||||| ||| ||| ||||||| |||| Sbjct: 40508 ttgtgatgtgtctgaatattacctttgaattcccaaactcttagttataaactttcttta 40567 Query: 767 t 767 | Sbjct: 40568 t 40568 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6941 Number of Sequences: 1807 Number of extensions: 6941 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)