BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZE09RM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 741 0.0 >3x_Contig1801 Length = 57606 Score = 741 bits (374), Expect = 0.0 Identities = 404/409 (98%), Gaps = 4/409 (0%) Strand = Plus / Minus Query: 87 gcctttggngttcttcaacaagttgatatccctttgaaccaaactcaaactttggcccct 146 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33212 gcctttgg-gttcttcaacaagttgatatccctttgaaccaaactcaaactttggcccct 33154 Query: 147 ggaaccatcttctctttcgaaagtatagttagaagcatcagcttcgatgtaaaccaaagc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33153 ggaaccatcttctctttcgaaagtatagttagaagcatcagcttcgatgtaaaccaaagc 33094 Query: 207 acctttcttgacgtattgtgtcatgaaattgatgtggttagtgttgaaaacagtgacatt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33093 acctttcttgacgtattgtgtcatgaaattgatgtggttagtgttgaaaacagtgacatt 33034 Query: 267 gaaccagtttgtgttgctgtcctttcttggctgagaagcaatggagtatttcaagtaacg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33033 gaaccagtttgtgttgctgtcctttcttggctgagaagcaatggagtatttcaagtaacg 32974 Query: 327 agtatcgttagcagtagtaaactcttggtattcgctaccaatacggccgataatggacat 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32973 agtatcgttagcagtagtaaactcttggtattcgctaccaatacggccgataatggacat 32914 Query: 387 cttggcaaaatcattggtgcgggcagtggccgaaaaggcacggcgttnggctaatctgaa 446 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 32913 cttggcaaaatcattggtgcgggcagtggccgaaaaggcacggcgttgggctaatctgaa 32854 Query: 447 caattgggtgtttaattgtttaaatgataatgataattttatcactggg 495 | ||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 32853 c-attgggtgtttaattgttt-aatgataatgataa-tttatcactggg 32808 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 32,901 Number of Sequences: 1807 Number of extensions: 32901 Number of successful extensions: 2953 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)