BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZF05FM1.SCF screened BAC_end (1026 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1793 1029 0.0 >3x_Contig1793 Length = 40499 Score = 1029 bits (519), Expect = 0.0 Identities = 546/551 (99%), Gaps = 3/551 (0%) Strand = Plus / Minus Query: 85 cttaggtgtggaagtgctgatatactgaactatattcatcctgtacacaagtttttgatt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4149 cttaggtgtggaagtgctgatatactgaactatattcatcctgtacacaagtttttgatt 4090 Query: 145 ctttcttctcttgattcaaatcacttcaatccgcaaattgctaagaaataaacagtcaag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4089 ctttcttctcttgattcaaatcacttcaatccgcaaattgctaagaaataaacagtcaag 4030 Query: 205 ccattgacgaagtccatatattcaattcattttctcctataaaatgtcacctatcgcaca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4029 ccattgacgaagtccatatattcaattcattttctcctataaaatgtcacctatcgcaca 3970 Query: 265 cttattgaatgccagtaccggcactgattcaggtagtcatttgcgcgatatccatggtca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3969 cttattgaatgccagtaccggcactgattcaggtagtcatttgcgcgatatccatggtca 3910 Query: 325 tcacgatagtcacgatcacggttcggaggagcaggctgtcagtcctttgtctcctcgctc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3909 tcacgatagtcacgatcacggttcggaggagcaggctgtcagtcctttgtctcctcgctc 3850 Query: 385 gtatccatctcctcgcagcaacagcagtagtagctgcgaagagagtcaatcctcagctgg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3849 gtatccatctcctcgcagcaacagcagtagtagctgcgaagagagtcaatcctcagctgg 3790 Query: 445 ggttctagctaacattcataccggaccggcttcccctcatggaaaggcatgtgttgcgtc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3789 ggttctagctaacattcataccggaccggcttcccctcatggaaaggcatgtgttgcgtc 3730 Query: 505 ttcacccctttccaccactggtatgagatctgcctctacgccttctagctctgacgaaga 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3729 ttcacccctttccaccactggtatgagatctgcctctacgccttctagctctgacgaaga 3670 Query: 565 tactgtttcatttgcaccgctgccaatgaaaaggcttgtagttgggagttcactttctcc 624 ||||| |||||||||||||||||||||| |||||| ||||||| ||||||||| |||||| Sbjct: 3669 tactg-ttcatttgcaccgctgccaatggaaaggc-tgtagtttggagttcac-ttctcc 3613 Query: 625 cgaactacttt 635 ||||||||||| Sbjct: 3612 cgaactacttt 3602 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,662 Number of Sequences: 1807 Number of extensions: 15662 Number of successful extensions: 311 Number of sequences better than 1.0e-20: 1 length of query: 1026 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1010 effective length of database: 10,329,639 effective search space: 10432935390 effective search space used: 10432935390 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)