BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZF07FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1679 1063 0.0 >3x_Contig1679 Length = 11609 Score = 1063 bits (536), Expect = 0.0 Identities = 607/622 (97%), Gaps = 7/622 (1%) Strand = Plus / Minus Query: 86 tttattttacatgaaacatgtttgagacatcttaaaagttaaaacgtctgagatgccact 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4864 tttattttacatgaaacatgtttgagacatcttaaaagttaaaacgtctgagatgccact 4805 Query: 146 tctaaccgtaaacaggcagataagaaagagagcagagaaaaatttctatcgtgtttcacc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4804 tctaaccgtaaacaggcagataagaaagagagcagagaaaaatttctatcgtgtttcacc 4745 Query: 206 ataaactagctccaatgctacccttgatgtacaaaatatggcgacttttgttatcgaact 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4744 ataaactagctccaatgctacccttgatgtacaaaatatggcgacttttgttatcgaact 4685 Query: 266 ctgcatttgataatattacttaattttatcgagatataatactgatttgaacaatcgagt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 ctgcatttgataatattacttaattttatcgagatataatactgatttgaacaatcgagt 4625 Query: 326 ttccatgtttacataatgttccacacatcttcacaaccatgacagaacttggagcatgca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4624 ttccatgtttacataatgttccacacatcttcacaaccatgacagaacttggagcatgca 4565 Query: 386 accgaagcagataatggatagttggatagaccaatcttttcatccacaaattcatctgca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4564 accgaagcagataatggatagttggatagaccaatcttttcatccacaaattcatctgca 4505 Query: 446 aaattatctttacccctggccatggcaccaacanacacacatatactttcatcatcatcc 505 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4504 aaattatctttacccctggccatggcaccaacaaacacacatatactttcatcatcatcc 4445 Query: 506 aacttttccacgtagtcttgcactcttatgacaggtgcatcgaaggacaaggtgatttta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4444 aacttttccacgtagtcttgcactcttatgacaggtgcatcgaaggacaaggtgatttta 4385 Query: 566 cgacatttgggttggtagggtggtcggtaatttggattcttattgacctttcaacaattt 625 |||||||| |||||||| |||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 4384 cgacattt-ggttggta-ggtggtcggtaa-ttggattcttaatgacc-ttcaacaattt 4329 Query: 626 ttctttaaagataactgatctgatggatagtttatgcaaataattgaaccatttaacact 685 ||||| | || |||||||||||||||||||||||||| |||||||| |||||| ||| || Sbjct: 4328 ttcttcagagttaactgatctgatggatagtttatgc-aataattggaccattaaac-ct 4271 Query: 686 gagaaaacgnttgaaagttctt 707 ||| ||||| |||||||||||| Sbjct: 4270 gag-aaacgtttgaaagttctt 4250 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7622 Number of Sequences: 1807 Number of extensions: 7622 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)