BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZG07RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig361 618 e-177 >3x_Contig361 Length = 1383 Score = 618 bits (312), Expect = e-177 Identities = 379/391 (96%), Gaps = 8/391 (2%) Strand = Plus / Minus Query: 425 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 1311 Query: 485 gcttcataaaacgcgacagcctcggaagagtaatttgaaagatcccgttcactcttagca 544 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 gcttcataaaacgcgaca-cctcggaagagtaatttgaaagatcccgttcactcttagca 1252 Query: 545 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 1192 Query: 605 gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 1132 Query: 665 tatggaatatncgtatctgccacatgattctggggcagatcatcaacccgatatgggggt 724 |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || || Sbjct: 1131 tatggaatattcgtatctgcaacatgattctggggcagatcatcaaccggatat-ggtgt 1073 Query: 725 attcttacttggcctcgtgaccctggcgggtacatgttttatgtagttgccatacgncgt 784 |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1072 attcttacttgg-ctcgtga-cctggcgggtacatg-tttatgtagttgccatacg-cgt 1017 Query: 785 ttctttgtcggttggttattccattctattt 815 ||||||||||||| |||| |||||||||||| Sbjct: 1016 ttctttgtcggtt-gtta-tccattctattt 988 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5127 Number of Sequences: 1807 Number of extensions: 5127 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)