BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC46ZG07RM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig361                                                          618   e-177

>3x_Contig361 
          Length = 1383

 Score =  618 bits (312), Expect = e-177
 Identities = 379/391 (96%), Gaps = 8/391 (2%)
 Strand = Plus / Minus

                                                                        
Query: 425  caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 caccatttcaactggatatccttcgtaaacttgtttgcgtccttgacggttctgtcatat 1311

                                                                        
Query: 485  gcttcataaaacgcgacagcctcggaagagtaatttgaaagatcccgttcactcttagca 544
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 gcttcataaaacgcgaca-cctcggaagagtaatttgaaagatcccgttcactcttagca 1252

                                                                        
Query: 545  ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 ctgctaggcgggttatccactttgggtatgctgacttgctgcgccggtggtggttgtcgt 1192

                                                                        
Query: 605  gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gatactggcgtcgttaccgttgactgggagctttgtcttgtatctttctcatacatttgg 1132

                                                                        
Query: 665  tatggaatatncgtatctgccacatgattctggggcagatcatcaacccgatatgggggt 724
            |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| || ||
Sbjct: 1131 tatggaatattcgtatctgcaacatgattctggggcagatcatcaaccggatat-ggtgt 1073

                                                                        
Query: 725  attcttacttggcctcgtgaccctggcgggtacatgttttatgtagttgccatacgncgt 784
            |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| |||
Sbjct: 1072 attcttacttgg-ctcgtga-cctggcgggtacatg-tttatgtagttgccatacg-cgt 1017

                                           
Query: 785  ttctttgtcggttggttattccattctattt 815
            ||||||||||||| |||| ||||||||||||
Sbjct: 1016 ttctttgtcggtt-gtta-tccattctattt 988


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5127
Number of Sequences: 1807
Number of extensions: 5127
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)