BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZG09FM1.SCF screened BAC_end (801 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1201 357 2e-98 >3x_Contig1201 Length = 5468 Score = 357 bits (180), Expect = 2e-98 Identities = 232/243 (95%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 89 ataaatgatttaagtagagttaaaaagtcaccatctcggaagaagaaactatgcgattcg 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3319 ataaatgatttaagtagagttaaaaagtcaccatctcggaagaagaaactatgcgattcg 3378 Query: 149 cctactactcgcagtttgccgcagacaacaagaaaaccaagactgaaatatagaccagaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3379 cctactactcgcagtttgccgcagacaacaagaaaaccaagactgaaatatagaccagaa 3438 Query: 209 ctggatactgtttttcctt--gaatattatgttga-ggatctgcc-agagctcatc-aaa 263 ||||||||||||||||||| || |||||||||| ||||||||| |||||||||| ||| Sbjct: 3439 ctggatactgtttttcctttggataattatgttgagggatctgccaagagctcatcaaaa 3498 Query: 264 gatgctgaattttt-acatacgtgttaagtaattcgaaacgaatcgtggtgttccaggga 322 |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||| Sbjct: 3499 gatgctgaatttttaacatacgtgttaagttattcgaaacgaatcgtggtggtccaagga 3558 Query: 323 gct 325 ||| Sbjct: 3559 gct 3561 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 28,483 Number of Sequences: 1807 Number of extensions: 28483 Number of successful extensions: 829 Number of sequences better than 1.0e-20: 1 length of query: 801 length of database: 10,358,551 effective HSP length: 16 effective length of query: 785 effective length of database: 10,329,639 effective search space: 8108766615 effective search space used: 8108766615 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)