BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZG12FM1.SCF screened BAC_end (991 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1016 959 0.0 >3x_Contig1016 Length = 4444 Score = 959 bits (484), Expect = 0.0 Identities = 560/579 (96%), Gaps = 5/579 (0%) Strand = Plus / Minus Query: 86 atagatataggtatgatcagcaacagcggtatcgtagcatcctcacacgatttaggttcg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2635 atagatataggtatgatcagcaacagcggtatcgtagcatcctcacacgatttaggttcg 2576 Query: 146 agctatgtgcaagatcaaagagaaattttacatgacgtacccttaacggtacttcccagt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2575 agctatgtgcaagatcaaagagaaattttacatgacgtacccttaacggtacttcccagt 2516 Query: 206 tcgaaaataaaacaggacacaaggaaggcgattcaagaatttcacaaaaagtacttcgct 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2515 tcgaaaataaaacaggacacaaggaaggcgattcaagaatttcacaaaaagtacttcgct 2456 Query: 266 aacctagtgaaaaaccttaccgtggaatataacaagccattggtcgccaatatcgaatcg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2455 aacctagtgaaaaaccttaccgtggaatataacaagccattggtcgccaatatcgaatcg 2396 Query: 326 tgacgcaataggtttctgcactattagcgcactcaaaatgggttcaccanatgttgaaat 385 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2395 tgacgcaataggtttctgcactattagcgcactcaaaatgggttcaccaaatgttgaaat 2336 Query: 386 gcgatatatcactatatacgtctgaacatttctcaatctttgtaaggtactttcactctc 445 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2335 gcgatatatcactatatacgtctgaacatttctcaatcttgtaaaggtactttcactctc 2276 Query: 446 tttattgaaaacattgaaatatacaaacttttgttg-atagacatattaaacaattcgca 504 |||||||||||||||||||||||||||| ||||| | |||||||||| ||||||| |||| Sbjct: 2275 tttattgaaaacattgaaatatacaaac-tttgtagaatagacatataaaacaatacgca 2217 Query: 505 gtatacgattttgttttgtcaaaggagccaattaagtacggtttgagtaagtgcccttga 564 ||||||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||| Sbjct: 2216 gtatacgattttggtttgtcaaaggagccaattaggtacggttagagtaagtg-ccttga 2158 Query: 565 ctgctgcatatatactgaaaatttgttcatttaaaaagccaaggaggcgaggaagcaaaa 624 ||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||| Sbjct: 2157 ctgctgcatatatactg-aaatttgttcatttaagaagccaaggaagcgaggaggcaaaa 2099 Query: 625 aaaaaagcctaaacaaactggaaagcgcccaaatactat 663 |||||||| |||||||||||||||||| ||||||||||| Sbjct: 2098 aaaaaagcataaacaaactggaaagcg-ccaaatactat 2061 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8488 Number of Sequences: 1807 Number of extensions: 8488 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 991 length of database: 10,358,551 effective HSP length: 16 effective length of query: 975 effective length of database: 10,329,639 effective search space: 10071398025 effective search space used: 10071398025 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)