BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH01RM1.SCF screened BAC_end (893 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig911 1596 0.0 >3x_Contig911 Length = 4722 Score = 1596 bits (805), Expect = 0.0 Identities = 828/833 (99%), Gaps = 2/833 (0%) Strand = Plus / Plus Query: 49 aagtcggttgcttgtgataacgtgcggtacatcccaggggaaagatgagatattccagta 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 aagtcggttgcttgtgataacgtgcggtacatcccaggggaaagatgagatattccagta 1202 Query: 109 tatcccaataatgaactgtatattctcggcaaccaaaatgaaatgttccatcgatgtggt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1203 tatcccaataatgaactgtatattctcggcaaccaaaatgaaatgttccatcgatgtggt 1262 Query: 169 taagattggtgggggtatagaaagcactttcttgcaacaagcaactgatgccactagtgg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1263 taagattggtgggggtatagaaagcactttcttgcaacaagcaactgatgccactagtgg 1322 Query: 229 ggtgtacttacatgtagaaaacacaagaggtttaattcaatatttatcaacggccatgtt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1323 ggtgtacttacatgtagaaaacacaagaggtttaattcaatatttatcaacggccatgtt 1382 Query: 289 tatagatccgtctttgagaaatgtgataattaaaccaaatcaagggtctgtcgattttag 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1383 tatagatccgtctttgagaaatgtgataattaaaccaaatcaagggtctgtcgattttag 1442 Query: 349 aacttcatgttttctaacgggtaaagtggtcgctgtcggatttgtgtgtagtgtttgctt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1443 aacttcatgttttctaacgggtaaagtggtcgctgtcggatttgtgtgtagtgtttgctt 1502 Query: 409 atgtgtgctttcagtgatacctccaggtcagaaatgtcctgcttgtgactcgccgtttga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1503 atgtgtgctttcagtgatacctccaggtcagaaatgtcctgcttgtgactcgccgtttga 1562 Query: 469 cagtaagattatcgccagactcagaagaaagcctgtattgagcaatggtgtaccgaagaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1563 cagtaagattatcgccagactcagaagaaagcctgtattgagcaatggtgtaccgaagaa 1622 Query: 529 gaaaaatgttagtaataaatagcatcggggttttccatacctatttaaagtacatatata 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 gaaaaatgttagtaataaatagcatcggggttttccatacctatttaaagtacatatata 1682 Query: 589 atcactgtcagcaaccactatttaaaatatcaaagtcaaactgatcactatagtaatggt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 atcactgtcagcaaccactatttaaaatatcaaagtcaaactgatcactatagtaatggt 1742 Query: 649 gtctctttaaatgatcgattctctcgtttgaatttgaaaacgtcatcgaacaatcttgtt 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1743 gtctctttaaatgatcgattctctcgtttgaatttgaaaacgtcatcgaacaatcttgtt 1802 Query: 709 ccaggcatcttagcctgtaattaccgttcttgaacggattatgaaattcttcgatatgta 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1803 ccaggcatcttagcctgtaattaccgttcttgaacggattatgaaattcttcgatatgta 1862 Query: 769 attccatcccatactcactagcaaagttccttaagcattgcgtacatacgttctcgtgca 828 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1863 attccatccaatactcactagcaaagttccttaagcattgcgtacatacgttctcgtgca 1922 Query: 829 tctgggctgacatgactagggtacaattcttatagaaccccattcatgatcac 881 ||| ||||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 1923 tct-ggctgacatgactagggtacaattc-tataggaacccattcatgatcac 1973 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5939 Number of Sequences: 1807 Number of extensions: 5939 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 893 length of database: 10,358,551 effective HSP length: 16 effective length of query: 877 effective length of database: 10,329,639 effective search space: 9059093403 effective search space used: 9059093403 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)