BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC46ZH05RM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1726                                                        1419   0.0  

>3x_Contig1726 
          Length = 20144

 Score = 1419 bits (716), Expect = 0.0
 Identities = 811/834 (97%), Gaps = 8/834 (0%)
 Strand = Plus / Minus

                                                                        
Query: 68   cattgaattctcaccagaagaattcgaaaatgaaaaaagaccagagtttggttgtacatt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4269 cattgaattctcaccagaagaattcgaaaatgaaaaaagaccagagtttggttgtacatt 4210

                                                                        
Query: 128  aaggctattaaaatcaaaactttatcacttctttaaagatggtcacttttatgatcagtt 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4209 aaggctattaaaatcaaaactttatcacttctttaaagatggtcacttttatgatcagtt 4150

                                                                        
Query: 188  caaacagccaagcaaaaccttcaccattaccaaaaatgtaaaaatctacaacaccatgag 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4149 caaacagccaagcaaaaccttcaccattaccaaaaatgtaaaaatctacaacaccatgag 4090

                                                                        
Query: 248  cgaggaacttccaaaaaacctcgacgatattcaattgtgtttcttaaagatggaaactgg 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4089 cgaggaacttccaaaaaacctcgacgatattcaattgtgtttcttaaagatggaaactgg 4030

                                                                        
Query: 308  tgacactatagactgtgagtttttggtgtgaaaattgcaagctgccgttaaatgcttgaa 367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 tgacactatagactgtgagtttttggtgtgaaaattgcaagctgccgttaaatgcttgaa 3970

                                                                        
Query: 368  aacataatgtgaatatagggaacccatgcatatatagtataaaagattatagattttgca 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3969 aacataatgtgaatatagggaacccatgcatatatagtataaaagattatagattttgca 3910

                                                                        
Query: 428  ctaaatcactccttcaaccctcggaacaccaacatccgaactatgcaattggttttcaca 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3909 ctaaatcactccttcaaccctcggaacaccaacatccgaactatgcaattggttttcaca 3850

                                                                        
Query: 488  ccaaacccaaagtttcatgatttgtaccaatctaacgtcgttagggatataataagaatg 547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3849 ccaaacccaaagtttcatgatttgtaccaatctaacgtcgttagggatataataagaatg 3790

                                                                        
Query: 548  caagttctcacctaactcttcaaagatttcaccttgtatgcgactcatgtcggaattggt 607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3789 caagttctcacctaactcttcaaagatttcaccttgtatgcgactcatgtcggaattggt 3730

                                                                        
Query: 608  gctcatagaacttccctgcttttcttcaatatgtgctagcntctcc-gtaagcctttctg 666
            |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 3729 gctcatagaacttccctgcttttcttcaatatgtgctagc-tctccggtaagcctttctg 3671

                                                                        
Query: 667  tcgtgatagattcccttggaatgggatcgtat-acgtttgttagagtgggaactcgattt 725
            |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 3670 tcgtgatagattcccttggaat-ggatcgtataacgtttgttagagtgggaactcgattt 3612

                                                                        
Query: 726  gattggaagctggatccctagatgtcanngtaacccagatttttcgagtngagagtttat 785
            |||||||||||||||||  ||||||||  |||| ||||||||||||||| ||||||||||
Sbjct: 3611 gattggaagctggatcctaagatgtca-ggtaaaccagatttttcgagttgagagtttat 3553

                                                                        
Query: 786  cctnncgtatatcgattgcaaaagctttctg-tcactagatcagctactttagtnctcat 844
            |||     ||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 3552 cctcggtaatatcgattgcaaaagctttctgttcactagatcagctactttagttctcat 3493

                                                                  
Query: 845  attttagggataatagctgtttcaacttctttggttaacttancaaaaggactc 898
            |||| ||| || |||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 3492 atttaaggaat-atagctgtttcaacttctttgg-taacttagcagaaggactc 3441


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6853
Number of Sequences: 1807
Number of extensions: 6853
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)