BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH05RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1726 1419 0.0 >3x_Contig1726 Length = 20144 Score = 1419 bits (716), Expect = 0.0 Identities = 811/834 (97%), Gaps = 8/834 (0%) Strand = Plus / Minus Query: 68 cattgaattctcaccagaagaattcgaaaatgaaaaaagaccagagtttggttgtacatt 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269 cattgaattctcaccagaagaattcgaaaatgaaaaaagaccagagtttggttgtacatt 4210 Query: 128 aaggctattaaaatcaaaactttatcacttctttaaagatggtcacttttatgatcagtt 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4209 aaggctattaaaatcaaaactttatcacttctttaaagatggtcacttttatgatcagtt 4150 Query: 188 caaacagccaagcaaaaccttcaccattaccaaaaatgtaaaaatctacaacaccatgag 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4149 caaacagccaagcaaaaccttcaccattaccaaaaatgtaaaaatctacaacaccatgag 4090 Query: 248 cgaggaacttccaaaaaacctcgacgatattcaattgtgtttcttaaagatggaaactgg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4089 cgaggaacttccaaaaaacctcgacgatattcaattgtgtttcttaaagatggaaactgg 4030 Query: 308 tgacactatagactgtgagtttttggtgtgaaaattgcaagctgccgttaaatgcttgaa 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4029 tgacactatagactgtgagtttttggtgtgaaaattgcaagctgccgttaaatgcttgaa 3970 Query: 368 aacataatgtgaatatagggaacccatgcatatatagtataaaagattatagattttgca 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3969 aacataatgtgaatatagggaacccatgcatatatagtataaaagattatagattttgca 3910 Query: 428 ctaaatcactccttcaaccctcggaacaccaacatccgaactatgcaattggttttcaca 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3909 ctaaatcactccttcaaccctcggaacaccaacatccgaactatgcaattggttttcaca 3850 Query: 488 ccaaacccaaagtttcatgatttgtaccaatctaacgtcgttagggatataataagaatg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3849 ccaaacccaaagtttcatgatttgtaccaatctaacgtcgttagggatataataagaatg 3790 Query: 548 caagttctcacctaactcttcaaagatttcaccttgtatgcgactcatgtcggaattggt 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3789 caagttctcacctaactcttcaaagatttcaccttgtatgcgactcatgtcggaattggt 3730 Query: 608 gctcatagaacttccctgcttttcttcaatatgtgctagcntctcc-gtaagcctttctg 666 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 3729 gctcatagaacttccctgcttttcttcaatatgtgctagc-tctccggtaagcctttctg 3671 Query: 667 tcgtgatagattcccttggaatgggatcgtat-acgtttgttagagtgggaactcgattt 725 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 3670 tcgtgatagattcccttggaat-ggatcgtataacgtttgttagagtgggaactcgattt 3612 Query: 726 gattggaagctggatccctagatgtcanngtaacccagatttttcgagtngagagtttat 785 ||||||||||||||||| |||||||| |||| ||||||||||||||| |||||||||| Sbjct: 3611 gattggaagctggatcctaagatgtca-ggtaaaccagatttttcgagttgagagtttat 3553 Query: 786 cctnncgtatatcgattgcaaaagctttctg-tcactagatcagctactttagtnctcat 844 ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 3552 cctcggtaatatcgattgcaaaagctttctgttcactagatcagctactttagttctcat 3493 Query: 845 attttagggataatagctgtttcaacttctttggttaacttancaaaaggactc 898 |||| ||| || |||||||||||||||||||||| ||||||| || |||||||| Sbjct: 3492 atttaaggaat-atagctgtttcaacttctttgg-taacttagcagaaggactc 3441 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6853 Number of Sequences: 1807 Number of extensions: 6853 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)