BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH07RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1080 1318 0.0 >3x_Contig1080 Length = 4249 Score = 1318 bits (665), Expect = 0.0 Identities = 708/720 (98%), Gaps = 2/720 (0%) Strand = Plus / Minus Query: 47 tacaaattctgagaagaatgtcgtatacacctcaggtaagagtattttgtgaattgttaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2697 tacaaattctgagaagaatgtcgtatacacctcaggtaagagtattttgtgaattgttaa 2638 Query: 107 cggcgtctgcggtgccacggtgatgacactgaatctgtccatcgggttgatatgaaatga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2637 cggcgtctgcggtgccacggtgatgacactgaatctgtccatcgggttgatatgaaatga 2578 Query: 167 gctaacatctgtcctcaaaaacgtaacaaaacaatttgaaaatgtcggtacagggtcggg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2577 gctaacatctgtcctcaaaaacgtaacaaaacaatttgaaaatgtcggtacagggtcggg 2518 Query: 227 ataccattgttttatcgtttcatggaagaatccgtcttcattgataggataacaataata 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2517 ataccattgttttatcgtttcatggaagaatccgtcttcattgataggataacaataata 2458 Query: 287 acaaatgtggccacaactatgttcttttctgaatcgagtgatttcttttaagctccgttc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2457 acaaatgtggccacaactatgttcttttctgaatcgagtgatttcttttaagctccgttc 2398 Query: 347 tgcagctgttgcgtcagaagattgtactatgtccgatctccaagagaaagaatctctata 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2397 tgcagctgttgcgtcagaagattgtactatgtccgatctccaagagaaagaatctctata 2338 Query: 407 ccgtttataggaaggtgatgcttgaaattcttcgtcttgaacgtaatcgtctggtaagtt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2337 ccgtttataggaaggtgatgcttgaaattcttcgtcttgaacgtaatcgtctggtaagtt 2278 Query: 467 caatatgaacccaaatatgtcaccaaccgcagaacatacatatagaaacttatctttata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2277 caatatgaacccaaatatgtcaccaaccgcagaacatacatatagaaacttatctttata 2218 Query: 527 ctctaaaccaacaatggttgtatcatttgtagttatactcgaaatcattggtacgcaaaa 586 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2217 ctctaaaccaacaatggttgtatcatttgtagttatactcgaagtcattggtacgcaaaa 2158 Query: 587 tagtagaaaatctggtcgt-aaggaacgttattggttaccttaaaaatgtagtcctttat 645 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 2157 tagtagaaaatctggtcgtaaaggaacgttattggttaccttaaaattgtagtcctttat 2098 Query: 646 tatttcgattatgccattatttcttgncaccaaaagaaagtctgaatgctcttgattgtg 705 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2097 tatttcgattatgccattattccttgcaaccaaaagaaagtctgaatgctcttgattgtg 2038 Query: 706 cagatattttgatgttcgtacattaggcatacttctttggtcgtagattacagaactttt 765 ||||||||||||||| ||||| ||||||||| || |||||||||||| ||||||||||| Sbjct: 2037 cagatattttgatgtcggtacaataggcatac-tccttggtcgtagataacagaactttt 1979 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7149 Number of Sequences: 1807 Number of extensions: 7149 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)