BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH08FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig830 1084 0.0 >3x_Contig830 Length = 3109 Score = 1084 bits (547), Expect = 0.0 Identities = 651/681 (95%), Gaps = 4/681 (0%) Strand = Plus / Plus Query: 86 cggattcgaatgatgaggacatttcaagctctgaactatcagatgctcctgaactgtcat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 cggattcgaatgatgaggacatttcaagctctgaactatcagatgctcctgaactgtcat 85 Query: 146 tcaatttcaaaggcgacgatgggatcaagttcggtgatgcttcagtagcctccaagaagg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 tcaatttcaaaggcgacgatgggatcaagttcggtgatgcttcagtagcctccaagaagg 145 Query: 206 ctgatgaagatttaggtgaggaagtcaaggataaagatgtgaaacaacctttagattcca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ctgatgaagatttaggtgaggaagtcaaggataaagatgtgaaacaacctttagattcca 205 Query: 266 ttaaaccaaatgtcgatagattggcggtaccgaaattttcagatagtgaggattcagatt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 ttaaaccaaatgtcgatagattggcggtaccgaaattttcagatagtgaggattcagatt 265 Query: 326 ataatatcgatcaagaggcatatttcaagaccattgatgatgataacgaaaatattaccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ataatatcgatcaagaggcatatttcaagaccattgatgatgataacgaaaatattaccg 325 Query: 386 gtatagataacggccttgagactggtgatgacgatatggctattctggatgttgaagaac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gtatagataacggccttgagactggtgatgacgatatggctattctggatgttgaagaac 385 Query: 446 agaatatggttaaacagcttgaacgtgatgatcattcttcnttcgatgattcgcangtgg 505 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 386 agaatatggttaaacagcttgaacgtgatgatcattcttctttcgatgattcgcaggtgg 445 Query: 506 aatcaaagtatagagatgggaaacccag-aatgacgacgatgatttcgattacgacgagg 564 |||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 446 aatcaaagtatagagatgggaaacccagaaatgacgacgatgattacgaatacgacgagg 505 Query: 565 acgatgaagatgatgcaatcatgagtgatttcgat-tggccttttatgaagatccaaagt 623 ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| Sbjct: 506 acgatgaagatgatgcaatcatgagtgatttcgatatgcccttttatgaagatcccaagt 565 Query: 624 ttt-caatctgtattactatgatggcagcgaccaaccttaaactttaa-cccatttttcc 681 ||| ||||||||||||||||||||||||||||||||| | |||||||| | ||| ||| | Sbjct: 566 tttccaatctgtattactatgatggcagcgaccaacccttaactttaagcacatctttac 625 Query: 682 cgttattgttaaacgagaagaaacttagaagggaatagcgtaagccatttaaacagcggt 741 ||||| |||||| ||| |||| | || |||||| ||||||||| ||| ||||||||| Sbjct: 626 cgttagtgttaagcgaagagaagcgtaagagggaagagcgtaagcaattaaaacagcggg 685 Query: 742 aaaggcagaataggtttaaaa 762 |||||||| | ||||| |||| Sbjct: 686 aaaggcaggagaggttgaaaa 706 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9233 Number of Sequences: 1807 Number of extensions: 9233 Number of successful extensions: 82 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)