BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH08RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig532 1394 0.0 >3x_Contig532 Length = 2251 Score = 1394 bits (703), Expect = 0.0 Identities = 812/837 (97%), Gaps = 9/837 (1%) Strand = Plus / Plus Query: 50 gcatccgggaaggtgaaagagggtactcccagcaagcataaacatcacacacaagtgtca 109 |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| Sbjct: 791 gcatccgggaaggtgaaagagggtac-cccagcaag-agaaacatcacacacaagtgtca 848 Query: 110 ctggaagaaatacccttggaatagacattccgcaacaattatccgtcaacccatccaaaa 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ctggaagaaatacccttggaatagacattccgcaacaattatccgtcaacccatccaaaa 908 Query: 170 atgcagtagaattctttgacaagagaaatcacaacatcccggcaacaagcaatatctcat 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 atgcagtagaattctttgacaagagaaatcacaacatcccggcaacaagcaatatctcat 968 Query: 230 ctacgaactggctctatcatcatgctgctgcatgcagtagattcaacagtgatcttttct 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 ctacgaactggctctatcatcatgctgctgcatgcagtagattcaacagtgatcttttct 1028 Query: 290 acgatagagaacgcattcttctcatcgaaaacctcggactaagagatacgtacacgaacg 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 acgatagagaacgcattcttctcatcgaaaacctcggactaagagatacgtacacgaacg 1088 Query: 350 tcttacatataccacaatccacacaatcgacgagagtgatatcagtgaagaaagtgaaag 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 tcttacatataccacaatccacacaatcgacgagagtgatatcagtgaagaaagtgaaag 1148 Query: 410 gaaacacaagccaagttatgtacgaaacaagaatcaaagctcttgacctagcaagacctt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 gaaacacaagccaagttatgtacgaaacaagaatcaaagctcttgacctagcaagacctt 1208 Query: 470 gcaccggtctttctgacgtccctacatcgatgtacgaagacatcttggacgaagatatag 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 gcaccggtctttctgacgtccctacatcgatgtacgaagacatcttggacgaagatatag 1268 Query: 530 tcgctgctatagaagaacaaaagagattcgaaacaagcctataacatagctgaactgacc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 tcgctgctatagaagaacaaaagagattcgaaacaagcctataacatagctgaactgacc 1328 Query: 590 tcccatgtatacgtgtatatctcaacatacgtaataagagtgtattatactaagtggccg 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 tcccatgtatacgtgtatatctcaacatacgtaataagagtgtattatactaagtggccg 1388 Query: 650 ggtaacgatatgtncttgctctacc-aaaatgaatttgggcttntcaaccagaacaa-cc 707 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| || Sbjct: 1389 ggtaacgatatgtccttgctctaccaaaaatgaatttgggcttttcaaccagaacaaccc 1448 Query: 708 cat-aggtgaacagacaagggcattttgcaccgat-aaaggagcgttagcagttacattt 765 ||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||| Sbjct: 1449 cataaggtgaacagacaaggccatttgccaccgataaaaggagcgtta-cagttacattt 1507 Query: 766 gcaatctacagtgggtgcattgtgaaatttagaccctatagtagtgt-aaatagccagtt 824 |||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||| | Sbjct: 1508 gcaatctacagtggttgcattgtgaatttaagaccctatagtagtgtaaaatagccaggt 1567 Query: 825 gtttggtgaaaacgctg-ttttgtctcggtttgttttcgggttaacaaagattttcc 880 ||||| ||||| |||| |||||||||||||||||| | ||||||||||||||||| Sbjct: 1568 gtttgttgaaacggctgtttttgtctcggtttgtttcggtgttaacaaagattttcc 1624 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5322 Number of Sequences: 1807 Number of extensions: 5322 Number of successful extensions: 23 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)