BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC46ZH12RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1788 1463 0.0 >3x_Contig1788 Length = 28493 Score = 1463 bits (738), Expect = 0.0 Identities = 812/831 (97%), Gaps = 5/831 (0%) Strand = Plus / Minus Query: 51 tgaaaaggtttaaaaacagtcaaatgtggtatcatttcaatcacaacaagaagctaacga 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5831 tgaaaaggtttaaaaacagtcaaatgtggtatcatttcaatcacaacaagaagctaacga 5772 Query: 111 taaagagtgcggccaggaatatccaacatctactatacggaaagagaatgttcccatatt 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5771 taaagagtgcggccaggaatatccaacatctactatacggaaagagaatgttcccatatt 5712 Query: 171 atgttcataccattattgctggattagatgaagaaggtaagggggccgtatatctctttc 230 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5711 atgttcataccattattgctggattagatgaagaaggtaagggggccgtata-ctctttc 5653 Query: 231 gatccagtgggctcttatgaaagggaacagtgcagggcaggtggctctgcggcctcctta 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5652 gatccagtgggctcttatgaaagggaacagtgcagggcaggtggctctgcggcctcctta 5593 Query: 291 atcatgccatttttggataaccaagtgaatttaaagaaccagtatgagcctgattctaat 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5592 atcatgccatttttggataaccaagtgaatttaaagaaccagtatgagcctgattctaat 5533 Query: 351 ggtactaaacgcaaagaagttaaatacttaggtgtggaagaagttatcaaattagtaaga 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5532 ggtactaaacgcaaagaagttaaatacttaggtgtggaagaagttatcaaattagtaaga 5473 Query: 411 gatgcgttcacatctgctactgagagacatatcaacgttggtgatggtctagagattttg 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5472 gatgcgttcacatctgctactgagagacatatcaacgttggtgatggtctagagattttg 5413 Query: 471 attgtcacaaaggatggtgtaagaaaagaatacttcgatttaaagagagattaagttaca 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5412 attgtcacaaaggatggtgtaagaaaagaatacttcgatttaaagagagattaagttaca 5353 Query: 531 ctcaattttttttacgaaatctttttgataaagtttctgaatcttagtgtacaatatata 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5352 ctcaattttttttacgaaatctttttgataaagtttctgaatcttagtgtacaatatata 5293 Query: 591 tatatatatagtaaaatattagatagtgttttattcgcttcgatcaatctgaagaaagct 650 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5292 tatatatatagtaaaatataagatagtgttttattcgcttcgatcaatctgaagaaagct 5233 Query: 651 tccgaactgactgncagtggagatgcanatcctgtcatctattgtggtaattctaaatct 710 ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5232 tccgaactgactgcaagtggagatgcaaatcctgtcatctattgtggtaattctaaatct 5173 Query: 711 tcaccgagtttgatacctttctgataatagatgttgaagaaatcagagtacactaaagtt 770 |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5172 ccaccgagtttgataaccttctgataatagatgtagaagaaatcagagtacactaaagtt 5113 Query: 771 ttgatcacaccggtgaaaactgatantttatcgaatcttttcttcggtataatacctcca 830 | |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 5112 tgaatcacaccggtgaaaactgataatttatcgaatc-tttcttcggtataatacctcca 5054 Query: 831 tatccaattttggaatgtacaagggcacggttatacccccaattcaaaaat 881 ||||||| ||||||||||||| ||||||| |||| ||||||| ||||||| Sbjct: 5053 tatccaa-attggaatgtacaa-ggcacgg-tataaccccaatgcaaaaat 5006 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,347 Number of Sequences: 1807 Number of extensions: 12347 Number of successful extensions: 1393 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)