BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA01FM1.SCF screened BAC_end (885 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1600 1015 0.0 >3x_Contig1600 Length = 9359 Score = 1015 bits (512), Expect = 0.0 Identities = 575/588 (97%), Gaps = 6/588 (1%) Strand = Plus / Minus Query: 76 ttgatcttcttttttaaaggtcctgcatcttgttttaccggtttcgcttctttctcttca 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2397 ttgatcttcttttttaaaggtcctgcatcttgttttaccggtttcgcttctttctcttca 2338 Query: 136 cccaattccgactcctcttcaggagtagtcgaaggagtagcgacaacctttctcctagaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2337 cccaattccgactcctcttcaggagtagtcgaaggagtagcgacaacctttctcctagaa 2278 Query: 196 cgagttct-ccattttcacgagcaggagttacggcttgctcagcagatattacagtattg 254 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2277 cgagttctaccattttcacgagcaggagttacggcttgctcagcagatattacagtattg 2218 Query: 255 gatgttgaggaagattcttcaggctcaacgctattttctagactttccaatcctaattgt 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2217 gatgttgaggaagattcttcaggctcaacgctattttctagactttccaatcctaattgt 2158 Query: 315 tttctttgacgtttttcacgagcagctctttgacgttcaatggtttcatctaagtcctca 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2157 tttctttgacgtttttcacgagcagctctttgacgttcaatggtttcatctaagtcctca 2098 Query: 375 tcattatcgacagcttgtaaccattgttcctctgttaaaccatcatcgtaatagactctc 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2097 tcattatcgacagcttgtaaccattgttcctctgttaaaccatcatcgtaatagactctc 2038 Query: 435 tttctttctctgattctgccaatagcagcaggctcaacattcaaatggtcagtgatatct 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2037 tttctttctctgattctgccaatagcagcaggctcaacattcaaatggtcagtgatatct 1978 Query: 495 tcagtgaatactgaaggtaactcttcccttggtgatcaacctcggcagtggctttctcaa 554 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1977 tcagtgaatactgaaggtaactctt-ccttggtgatcaacctcggcagtggctttctcaa 1919 Query: 555 acctaaaacgaagggttctctcttctcattagctacacgtttctttattcaatctttttg 614 ||||||| ||| || |||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 1918 acctaaatcgatggcttctctcttctcattagctacacg-ttcttca-tcaatctttttg 1861 Query: 615 aacagcacttttctcgtcttcagtccgcgccgaaaatttcatttaatt 662 |||||||| ||||||||||||||| || | ||| |||||||||||||| Sbjct: 1860 aacagcac-tttctcgtcttcagtacgtg-cgagaatttcatttaatt 1815 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7449 Number of Sequences: 1807 Number of extensions: 7449 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 885 length of database: 10,358,551 effective HSP length: 16 effective length of query: 869 effective length of database: 10,329,639 effective search space: 8976456291 effective search space used: 8976456291 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)