BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA03FM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1402 1164 0.0 >3x_Contig1402 Length = 8511 Score = 1164 bits (587), Expect = 0.0 Identities = 636/651 (97%), Gaps = 1/651 (0%) Strand = Plus / Minus Query: 89 cccaagcccagaaaccagatattgaaggatttctctgagctgatcatatgcttgccggat 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3507 cccaagcccagaaaccagatattgaaggatttctctgagctgatcatatgcttgccggat 3448 Query: 149 gggttttgcatacagtaaatatgaaaaataggtacactttgagtatgctagatagacttt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3447 gggttttgcatacagtaaatatgaaaaataggtacactttgagtatgctagatagacttt 3388 Query: 209 tcaacgttaatttttgtaatactaatacaaattggttcaaaagcactatagaccagcagt 268 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3387 tcaacgttaattgatgtaatactaatacaaattggttcaaaagcactatagaccagcagt 3328 Query: 269 caataacactaggtagaaaacatgctgtgttcgcaataacattgttgagaaattattgct 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3327 caataacactaggtagaaaacatgctgtgttcgcaataacattgttgagaaattattgct 3268 Query: 329 ggcaaacattcgttacaaacctatatttttcgaagagtcataggttcagtaatactgttc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3267 ggcaaacattcgttacaaacctatatttttcgaagagtcataggttcagtaatactgttc 3208 Query: 389 agaattttcattatattaaaactactcgtccctcagtcatgagatctcgtattacactat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3207 agaattttcattatattaaaactactcgtccctcagtcatgagatctcgtattacactat 3148 Query: 449 aacgtattacgtatactgccccgattaataagtaaatttcttcatttaaatcttcaataa 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3147 aacgtattacgtatactgccccgattaataagtaaatttcttcatttaaatcttcaataa 3088 Query: 509 tcactgagtaacagtgttttccatcatcatcggtcgttaatttcgaatcaataccacttt 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3087 tcactgagtaacagtgttttccatcatcatcggtcgttaatttcgaatcaataccacttt 3028 Query: 569 cgtcaactaccccaccacaaactagtataaatacagttttatttcaattcgggtcatcaa 628 ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| Sbjct: 3027 cgtcaactaccccaccacaaactagtataaatacagttttattccaatcgggttcatcaa 2968 Query: 629 tcatactgatggaaccctcagtatcgttaacggcttgcagttctttttgtaagtgcttaa 688 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 2967 tcatactgatggaaccctcagtatcgttaacggcttgcagttcttctggtaagtgcttaa 2908 Query: 689 gtactgcgttttttaaacaagtttagtattatgtcaaaatgctttatatgg 739 |||||||| || ||||||| ||||||| ||||||| ||||||| |||||| Sbjct: 2907 gtactgcg-ttgttaaacagttttagtaatatgtcagaatgcttcatatgg 2858 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7870 Number of Sequences: 1807 Number of extensions: 7870 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)