BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA04FM1.SCF screened BAC_end (893 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1145 952 0.0 >3x_Contig1145 Length = 5226 Score = 952 bits (480), Expect = 0.0 Identities = 534/548 (97%), Gaps = 3/548 (0%) Strand = Plus / Minus Query: 72 atctacatgtcagaaccagtgatggagaatatggcacctgaagatgtggtaaaacttgag 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4263 atctacatgtcagaaccagtgatggagaatatggcacctgaagatgtggtaaaacttgag 4204 Query: 132 aaagaagaacatattgtaccggatattggcgtctcttcgatttctaccactgaacccctg 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4203 aaagaagaacatattgtaccggatattggcgtctcttcgatttctaccactgaacccctg 4144 Query: 192 tctccatcggttataccaagggaatcatctggaactgttacctctgcaactgcagctaca 251 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4143 tctccatcgggtataccaagggaatcatctggaactgttacctctgcaactgcagctaca 4084 Query: 252 acagaaagagaagtatcacccaagaaggaactacaaattgatcatgatcgtgttgatcca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4083 acagaaagagaagtatcacccaagaaggaactacaaattgatcatgatcgtgttgatcca 4024 Query: 312 gtagcgatgatcggtgggtcaaccactagaagatatttgaatgaacatgtaacaaaacat 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4023 gtagcgatgatcggtgggtcaaccactagaagatatttgaatgaacatgtaacaaaacat 3964 Query: 372 ttattggaaggaatgaaactgatagccagagaaaagcccgaggatccacttcgagtatta 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3963 ttattggaaggaatgaaactgatagccagagaaaagcccgaggatccacttcgagtatta 3904 Query: 432 ggccagttcttgattgatgcaagcgaaatgaaccagaagccttcatcgtagatatgaatt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3903 ggccagttcttgattgatgcaagcgaaatgaaccagaagccttcatcgtagatatgaatt 3844 Query: 492 tacgactttctttaactaaagacatctgtattattattactattttatatatggatgttc 551 |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 3843 tacgactttcttaaactaaagacatctgtattattattattattttatatatgtatgttt 3784 Query: 552 ccctttcaatggccagttcacctattagatatctacctgaaactaaaacttctcctcttt 611 || ||||||| ||||||||| || ||||||||||| || ||||||||||||||||||| Sbjct: 3783 tcc-ttcaatgtccagttcactta-tagatatctacatg-aactaaaacttctcctcttc 3727 Query: 612 gaatattt 619 || ||||| Sbjct: 3726 gagtattt 3719 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7467 Number of Sequences: 1807 Number of extensions: 7467 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 893 length of database: 10,358,551 effective HSP length: 16 effective length of query: 877 effective length of database: 10,329,639 effective search space: 9059093403 effective search space used: 9059093403 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)