BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA06FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1385 1332 0.0 >3x_Contig1385 Length = 5361 Score = 1332 bits (672), Expect = 0.0 Identities = 759/784 (96%), Gaps = 3/784 (0%) Strand = Plus / Minus Query: 86 atctagaaaaagtagattatcaggtggtattaaaagctgacggtatcgctgcaggaaagg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4725 atctagaaaaagtagattatcaggtggtattaaaagctgacggtatcgctgcaggaaagg 4666 Query: 146 gtgttttgatccctactacccaagaagaagctcaagaagccttgaaaatcatcatggtgg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4665 gtgttttgatccctactacccaagaagaagctcaagaagccttgaaaatcatcatggtgg 4606 Query: 206 aaagacaattctttgtcgctggtaaaagcgttgtcattgaagaattcttggaaggagatg 265 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4605 aaagacaattcggtgacgctggtaaaagcgttgtcattgaagaattcttggaaggagatg 4546 Query: 266 aaatctccatcttgacaatctcagacggttactcatactttaacctaccaccagcccaag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4545 aaatctccatcttgacaatctcagacggttactcatactttaacctaccaccagcccaag 4486 Query: 326 accataagagaattggtgaaaatgacaccggtttgaacactggtggtatgggtgcttatg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4485 accataagagaattggtgaaaatgacaccggtttgaacactggtggtatgggtgcttatg 4426 Query: 386 ctccggcacctgttgctactccaaagttgttggaacaaattgataagactattgtcaaac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4425 ctccggcacctgttgctactccaaagttgttggaacaaattgataagactattgtcaaac 4366 Query: 446 caagtattgatggtatgagaaaggacaaattgccatttgtcggtgtcttgtttactggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4365 caagtattgatggtatgagaaaggacaaattgccatttgtcggtgtcttgtttactggta 4306 Query: 506 tcatcttgactaagaacggtcccaaggtattagagtacaatgttagatttggtgacccag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4305 tcatcttgactaagaacggtcccaaggtattagagtacaatgttagatttggtgacccag 4246 Query: 566 aaacgcaaacagtcttgccattgttgactgaagacaccgatttggctcaagtctttttag 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4245 aaacgcaaacagtcttgccattgttgactgaagacaccgatttggctcaagtctttttag 4186 Query: 626 cagctgctgaacatagattggattcagttgacatcaaaatcaaggaccactgctatgcta 685 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4185 cagctgctgaacatagattggattcagttgacatcaaaatcaaggacaactgctatgcta 4126 Query: 686 ctactgtagttttagctgctggtggctacccagagtcattacagaagggagacgagatta 745 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4125 ctactgtagttttagctgctggtggctacccagagtcatacaagaagggagacgagatta 4066 Query: 746 ccgttgattctttcaaaattcc-actgatacctacattttcc-tgctgggcccaaatctg 803 | |||||||||| || ||||| ||||||||||||||||||| |||||| | ||||||| Sbjct: 4065 cggttgattcttcgaagattccaactgatacctacattttccatgctggcacgaaatctg 4006 Query: 804 at-acggaaaaagggtcactaatggtgggagaatgattgcatcttttgctgttgccccca 862 || |||||||| | |||||||||||| ||| |||||||||||| |||||||||||| | Sbjct: 4005 ataacggaaaagtgtacactaatggtggtagagtgattgcatcttctgctgttgccccaa 3946 Query: 863 cttt 866 |||| Sbjct: 3945 cttt 3942 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6495 Number of Sequences: 1807 Number of extensions: 6495 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)