BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA08FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1781 1354 0.0 >3x_Contig1781 Length = 20717 Score = 1354 bits (683), Expect = 0.0 Identities = 802/832 (96%), Gaps = 8/832 (0%) Strand = Plus / Minus Query: 88 ctgagagagccttactggtcttagtgttcttttcgatcttgataaacagatgtgatttta 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16622 ctgagagagccttactggtcttagtgttcttttcgatcttgataaacagatgtgatttta 16563 Query: 148 aaatcgtagccgttgagtttggtgtcaataagttagtttgggtaccatcagctatgatgg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16562 aaatcgtagccgttgagtttggtgtcaataagttagtttgggtaccatcagctatgatgg 16503 Query: 208 caggtcctttttttttagtgccgatctccaaatcatccaatttgtacataggagtctcaa 267 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16502 caggtccttgtattttagtgccgatctccaaatcatccaatttgtacataggagtctcaa 16443 Query: 268 cccacccttcaccgaacataacaggtttcctgaataaaggttcaggagcagcctttgcta 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16442 cccacccttcaccgaacataacaggtttcctgaataaaggttcaggagcagcctttgcta 16383 Query: 328 ccaatctctgtagttgagaatcaatgtactcttcttctcttacgttggatacaccagtgg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16382 ccaatctctgtagttgagaatcaatgtactcttcttctcttacgttggatacaccagtgg 16323 Query: 388 cccttactcgcacatcatccactatgatcgatttatcctcaaacttgaatccaaactcct 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16322 cccttactcgcacatcatccactatgatcgatttatcctcaaacttgaatccaaactcct 16263 Query: 448 ttttatgtagttcatggaattggtttgtgtagcttgtatctcccgattctaagaccatta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16262 ttttatgtagttcatggaattggtttgtgtagcttgtatctcccgattctaagaccatta 16203 Query: 508 aagcggtttctgtaccctcatatctcaagttcaaatatntctccaatctgatagtctcag 567 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 16202 aagcggtttctgtaccctcatatctcaagttcaaatatttctccaatctgatagtctcag 16143 Query: 568 tgttgaagccttgntgctttagcgtgtcaatacatttggatgtgagcctattgaatttat 627 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16142 tgttgaagccttgttgctttagcgtgtcaatacatttggatgtgagcctattgaatttat 16083 Query: 628 cctcaatcaacgcatttggttcgcgattactttcatctagcacgtaagaacaaaggctct 687 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 16082 cctcaatcaacgcatttgtttcgcgattactttcatctagcacgtaagaac-aaggctct 16024 Query: 688 ctagactcttcaaccacatncgcaaagaacatgccatacgcaggaagattggaagaat-a 746 ||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||| | Sbjct: 16023 ctagactcttcaaccacatccgcaaggaacatgccatacgcagaaagaatggaagaataa 15964 Query: 747 cgatgaatcaaaactgtatc-atttcttatgtttcagcgatggattcggcatgttgacca 805 |||||||||||||||||||| ||| || ||||||||||||||||| |||||||||||||| Sbjct: 15963 cgatgaatcaaaactgtatcaattcctaatgtttcagcgatggatacggcatgttgacca 15904 Query: 806 cccagccccaccaaa-gaaattagacgatgcttggaaattacatgttcctttagcctcgg 864 |||||||||||||| ||||| |||||||||| ||||| ||||| |||||||||||||| Sbjct: 15903 -ccagccccaccaaaggaaataagacgatgctgcgaaatcacatg-tcctttagcctcgg 15846 Query: 865 tcaagtaacggattggcctaccctttgact-gttcgc-acttttaaaaaccc 914 |||| ||||||||||||| || |||||| |||||| |||||||| ||||| Sbjct: 15845 tcaaagtacggattggcctagccattgactcgttcgcaacttttaagaaccc 15794 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5759 Number of Sequences: 1807 Number of extensions: 5759 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)