BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC47ZA08RM1.SCF screened BAC_end
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1536 0.0
>3x_Contig1807
Length = 66587
Score = 1536 bits (775), Expect = 0.0
Identities = 830/843 (98%), Gaps = 4/843 (0%)
Strand = Plus / Plus
Query: 48 tatgaaagttacatcattcatggtaatccaccgtgacaccaaaggaattttttccagtga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36158 tatgaaagttacatcattcatggtaatccaccgtgacaccaaaggaattttttccagtga 36217
Query: 108 tgtaatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttcc-gc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 36218 tgtaatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttccagc 36277
Query: 167 cttacaatggaatctgaagtaaaaagtttgtactccagatgttcaacgcaataaatggtc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36278 cttacaatggaatctgaagtaaaaagtttgtactccagatgttcaacgcaataaatggtc 36337
Query: 227 ttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgttgaag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36338 ttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgttgaag 36397
Query: 287 tcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctcctaa 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36398 tcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctcctaa 36457
Query: 347 gataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacaccaattg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36458 gataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacaccaattg 36517
Query: 407 ggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaatttaccga 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36518 ggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaatttaccga 36577
Query: 467 cacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctatataca 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36578 cacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctatataca 36637
Query: 527 tagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgatagaca 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36638 tagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgatagaca 36697
Query: 587 atccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaatgcct 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36698 atccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaatgcct 36757
Query: 647 cggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcaaatatggtta 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36758 cggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcaaatatggtta 36817
Query: 707 aagaaacttgattcctgtgtaatgtgttaatgtcacttttttgttcagactctttcttct 766
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 36818 aagaaacttgattcctgtgtaatgtgttaatgtcacttttttgttcagactcttccttct 36877
Query: 767 caatctttatcg-tgtcactcgtgtctgtttcatcttgcgtgctgggagta-ttaacttt 824
||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 36878 caatc-ttatcgttgtcactcgtgtctgtttcatcttgcgtgctgggagtatttaacttt 36936
Query: 825 gcgaatagttttactaagtcccgcggcaaaaagacttcacttacacctagcacggcagaa 884
||||||||||||||||||||| ||| |||||| | || |||||||||||||||||||
Sbjct: 36937 gcgaatagttttactaagtccggcgcaaaaaagcttccagctacacctagcacggcagaa 36996
Query: 885 acc 887
|||
Sbjct: 36997 acc 36999
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6020
Number of Sequences: 1807
Number of extensions: 6020
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)