BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZA12RM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1612 1398 0.0 >3x_Contig1612 Length = 15608 Score = 1398 bits (705), Expect = 0.0 Identities = 801/821 (97%), Gaps = 9/821 (1%) Strand = Plus / Minus Query: 49 gagaaaaggaatccatgcgatggtaacgacgtatttaaaacattgtctgataattggcaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15068 gagaaaaggaatccatgcgatggtaacgacgtatttaaaacattgtctgataattggcaa 15009 Query: 109 tttatcattgagtccttgtccaaattgatagatcatattaagatacaggcaagagaacag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15008 tttatcattgagtccttgtccaaattgatagatcatattaagatacaggcaagagaacag 14949 Query: 169 ttaaacagaagacagactgattttgcgcaaatcatgggagggacctaccttatagaaaat 228 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 14948 ttaaacagaagacagactgattttgcgcaaatcatgggagggacctacctcagagaaaat 14889 Query: 229 aaacaaaaacttcccgttagtttagctgatatcgttaacgatcagttaatctttctaaga 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14888 aaacaaaaacttcccgttagtttagctgatatcgttaacgatcagttaatctttctaaga 14829 Query: 289 attcacaaatggaatacgttcatattaacaagattaaaggcagttcaagtagagacagtg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14828 attcacaaatggaatacgttcatattaacaagattaaaggcagttcaagtagagacagtg 14769 Query: 349 gattcggatggtcctaaaggtgcagtcaagccttaaatcttttatagacagtacataaaa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14768 gattcggatggtcctaaaggtgcagtcaagccttaaatcttttatagacagtacataaaa 14709 Query: 409 aaattcttctttccataacttaaacttgtagattgcagaactgatataatacttgcgagt 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14708 aaattcttctttccataacttaaacttgtagattgcagaactgatataatacttgcgagt 14649 Query: 469 tagtactgctcaatgtgcacttggttgtcttaaatgttgtaattgttgtatatacacata 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14648 tagtactgctcaatgtgcacttggttgtcttaaatgttgtaattgttgtatatacacata 14589 Query: 529 aatgtatgtattgggaatgctactgatattttcctagcaccgtagcggtaaataaaaggt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14588 aatgtatgtattgggaatgctactgatattttcctagcaccgtagcggtaaataaaaggt 14529 Query: 589 attggcggcttaaacgtttagcttaacttcgacatcagtgatatcatttttggaaagcag 648 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 14528 attggcggcttaaacgtttagcttaacttcgacatcagtgatatca-ttttggaaagcag 14470 Query: 649 ccaacgccttgtttgacatcgttgggcacgaacttctcaacttgttgaggagctctaccg 708 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14469 ccaacg-cttgtttgacatcgttggcaacgaacttctcaacttgttgaggagctctaccg 14411 Query: 709 acaaaggttgatggcttcaacaatgagtccaattcattccagataggttcgaagaacttt 768 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 14410 acaaaggtggatggctccaacaatgagtccaattcattccagataggttcgaagaac-tt 14352 Query: 769 gtcctgtctcacacgtttcgattcaagtcgttgtcaccactttgtttcttggacgacagg 828 ||||||||||||||| ||||| |||||||||||||||||| ||||| ||| |||||||| Sbjct: 14351 gtcctgtctcacacg-ttcga-tcaagtcgttgtcaccaccttgttcctt-gacgacagc 14295 Query: 829 gggagcttgggtgagaatagcactttgaatagcttcatgaa 869 || ||||| |||||| |||||||| || ||||||||||||| Sbjct: 14294 ggcagctt-ggtgag-atagcactctg-atagcttcatgaa 14257 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6813 Number of Sequences: 1807 Number of extensions: 6813 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)