BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZB03FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1245 0.0 >3x_Contig1791 Length = 39945 Score = 1245 bits (628), Expect = 0.0 Identities = 705/725 (97%), Gaps = 5/725 (0%) Strand = Plus / Plus Query: 86 tatttggtctggaaccaaatccaagtgaatataatcgatacgaagccaattccatcgaag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20135 tatttggtctggaaccaaatccaagtgaatataatcgatacgaagccaattccatcgaag 20194 Query: 146 agagtttcttatttaaccaataatcaaaaagttttggccaagcttcgatctcggaaatag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20195 agagtttcttatttaaccaataatcaaaaagttttggccaagcttcgatctcggaaatag 20254 Query: 206 attgagcgatggttcaatgtttttaccgactaaaactttaaaagtatcattctcagaatg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20255 attgagcgatggttcaatgtttttaccgactaaaactttaaaagtatcattctcagaatg 20314 Query: 266 ccataaattggaaacgatggaaattaagaattcatgcatgtaaatatacaacactgtatc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20315 ccataaattggaaacgatggaaattaagaattcatgcatgtaaatatacaacactgtatc 20374 Query: 326 agcgtatgaacagtaaaataacaaattatagttccttaagatagaaatcgatatcctata 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20375 agcgtatgaacagtaaaataacaaattatagttccttaagatagaaatcgatatcctata 20434 Query: 386 ctcctttgccggtatccgccgtctttttgttatataacctgtccgtcttattgctaccca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20435 ctcctttgccggtatccgccgtctttttgttatataacctgtccgtcttattgctaccca 20494 Query: 446 cattcaaaattctgggacagccatctcggcttcgttcagatctgtggcagtcccaacaat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20495 cattcaaaattctgggacagccatctcggcttcgttcagatctgtggcagtcccaacaat 20554 Query: 506 ataacgcttcatgcgttccaggactttcgc-aattatacacctgcttccactacttccag 564 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 20555 ataacgcttcatgcgttccaggacttccgcaaattatacacctgcttccactacttccag 20614 Query: 565 aggagcaagagtcgcatatccgtaccttag-aattagccttacatctgaatcacataagg 623 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20615 aggagcaagagtcgcatatccgtaccttagaaattagccttacatctgaatcacataagg 20674 Query: 624 gacatcttncatcacatttatcacaaaaccttccctacangagtttcaagaagtttcatg 683 |||||||| |||||||| |||||| |||||||||||||| ||| || ||||||||||| Sbjct: 20675 gacatcttccatcacatctatcac-aaaccttccctacagaggttccaggaagtttcatg 20733 Query: 684 cacataaccaagtcgtactgatggcgagacatcttaattcagtgatattaatagtaattt 743 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 20734 cacataaccaagtcgtactgatggcgagacatcttaatccagtgataataatagtaatat 20793 Query: 744 aaatggattaat-agacctgacggggtattggggaaaaacccttagttttctgtnctttg 802 |||| ||||||| ||||||||||| ||| ||||||||||| ||||||||||||| ||||| Sbjct: 20794 aaatagattaataagacctgacggtgta-tggggaaaaacacttagttttctgttctttg 20852 Query: 803 tttta 807 ||||| Sbjct: 20853 tttta 20857 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5535 Number of Sequences: 1807 Number of extensions: 5535 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)