BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZB05FM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1571 1366 0.0 >3x_Contig1571 Length = 13536 Score = 1366 bits (689), Expect = 0.0 Identities = 792/816 (97%), Gaps = 9/816 (1%) Strand = Plus / Plus Query: 90 gtggaaagagagcgagggattacaatcaaagcacagacatgctccatgttttaccaggat 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 gtggaaagagagcgagggattacaatcaaagcacagacatgctccatgttttaccaggat 704 Query: 150 cctagaacgaaattggactatctcttacatttagtggatacaccgggccatgtggatttt 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 cctagaacgaaattggactatctcttacatttagtggatacaccgggccatgtggatttt 764 Query: 210 cgtgctgatttttcaagatcgtatgcatcgtgtggtggcgctttgttactcgttgacgct 269 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cgtgctgaagtttcaagatcgtatgcatcgtgtggtggcgctttgttactcgttgacgct 824 Query: 270 tcccaaggtgttcaagcacagacagtcgcaaacttttacctcgcttatagtatggatttg 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 tcccaaggtgttcaagcacagacagtcgcaaacttttacctcgcttatagtatggatttg 884 Query: 330 aaacttattcctgtcataaacaagattgacttggacattgctgacattgaccaagcagaa 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 aaacttattcctgtcataaacaagattgacttggacattgctgacattgaccaagcagaa 944 Query: 390 gaacaggttgaaaatatgttcgagctacctaagtcagattgtatcaaagttagtgctaaa 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 945 gaacaggttgaaaatatgttcgagctacctaagtcagattgtatcaaagttagtgctaaa 1004 Query: 450 actggattgcacgtcgagcaattgttacccgctattgttgatagaatacctcctccgacc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 actggattgcacgtcgagcaattgttacccgctattgttgatagaatacctcctccgacc 1064 Query: 510 ggtaaagttgagaaaccattacgtgcattattggtggattcgtggtatgactcttattta 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 ggtaaagttgagaaaccattacgtgcattattggtggattcgtggtatgactcttattta 1124 Query: 570 ggagtggtgcttcttgtacatatagttgatggtcaagtgaaaagaggagataaaatcatc 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1125 ggagtggtgcttcttgtacatatagttgatggtcaagtgaaaagaggagataaaatcatc 1184 Query: 630 actgccgcaaatggattgaagtatgaagtgagggaatgcggtataatgtacccagatcgt 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 actgccgcaaatggattgaagtatgaagtgagggaatgcggtataatgtacccagatcgt 1244 Query: 690 gtcgctactaacacactgaaatcaggtcaagtcggttatttgggtacctggcatgaaaga 749 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1245 gtcgctactaacacactgaaatcaggtcaagtcgggtattt-ggtacctggcatgaaaga 1303 Query: 750 at-ttaggatgccaagattggtgatactttgatgcatcctgggtaaaggttcgattactg 808 || | |||||||||||||||||||||||||||||||| || ||||||| |||||||||| Sbjct: 1304 atctaaggatgccaagattggtgatactttgatgcat-ctcggtaaagaatcgattactg 1362 Query: 809 aagtgtttcccaggatttgaagaacccaaaaccatggttcttcgttgggagcttttcctt 868 ||||| || ||||||||||||||||| ||| |||||| |||||| | |||||||| ||| Sbjct: 1363 aagtg-ttaccaggatttgaagaaccaaaacccatgg-tcttcg-taggagctttccct- 1418 Query: 869 ggtggatggggccgaatttcaaagcgtttgacgatg 904 | |||||||||||| ||||||||||| ||||||| Sbjct: 1419 -gctgatggggccgaa-ttcaaagcgttagacgatg 1452 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5273 Number of Sequences: 1807 Number of extensions: 5273 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)