BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZC04FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1334 0.0 >3x_Contig1610 Length = 13981 Score = 1334 bits (673), Expect = 0.0 Identities = 692/697 (99%), Gaps = 1/697 (0%) Strand = Plus / Plus Query: 86 tacacatggtactaaacgaaggatttgtgaaagacaagtgttagttcaatacgtcagata 145 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2456 tacacatggtactaaacga-ggatttgtgaaagacaagtgttagttcaatacgtcagata 2514 Query: 146 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2515 tcgacactcactcaaaacacaatggtttctcaattattcgaagaaaaggtatgtggaatc 2574 Query: 206 gttgttgcaatggcttttgatttcccttaataatcatactaaccgcatcttacatttatc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2575 gttgttgcaatggcttttgatttcccttaataatcatactaaccgcatcttacatttatc 2634 Query: 266 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2635 tgcaggctaaagctgtcaatgaattgccatcaactccaaataacgatgaattgttgaaat 2694 Query: 326 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2695 tgtatgctctatacaagcaagcaaccgtcggtgacaacaccaaggaaaaaccaggcatgt 2754 Query: 386 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2755 tcaacttgaaggaccgttacaagtgggacgcctgggaattgttgaagggcacttcccaag 2814 Query: 446 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2815 aagatgccgaacaacagtacatcgaattggttgaccaattgatcaagaaatacgccccat 2874 Query: 506 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2875 agagctggatggtctcgcaagttattgcatcatctaactaactatctatatctacatata 2934 Query: 566 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2935 tattatccttgatccatatagctaatgataatacccttattactcggtttgaaacacgaa 2994 Query: 626 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2995 ttacaagtcacgtgaacaagctaacgccaactatttacccggctatttgcagttgagtgg 3054 Query: 686 caaaaaatcttttctttcctagcagtatataagttacccttcgttaaacaggagcacgat 745 |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3055 caaaaaattctttcttccctagcagtatataagttaccctccgttaaacaggagcacgat 3114 Query: 746 ccctatttttctcttcatttatggggttcatacattg 782 ||||||||||||||||||||||||||||||||||||| Sbjct: 3115 ccctatttttctcttcatttatggggttcatacattg 3151 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7179 Number of Sequences: 1807 Number of extensions: 7179 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)