BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD02FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1009 1320 0.0 >3x_Contig1009 Length = 4650 Score = 1320 bits (666), Expect = 0.0 Identities = 723/737 (98%), Gaps = 4/737 (0%) Strand = Plus / Plus Query: 85 caggtttcgctacccactctgtgaagacaaataaagcgtacctgtcctatttgactatgg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 caggtttcgctacccactctgtgaagacaaataaagcgtacctgtcctatttgactatgg 1667 Query: 145 gattcaccattccatttgtcgtttcatactattcgacttattctagtgctcaggatgagt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 gattcaccattccatttgtcgtttcatactattcgacttattctagtgctcaggatgagt 1727 Query: 205 tgaaaggaaggtcaaatccaagattatatttcggaaggttcctatgatcggtttaaatca 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1728 tgaaaggaaggtcaaatccaagattatatttcggaaggttcctatgatcggtttaaatca 1787 Query: 265 tggactacttgtatgaaaaaggttgcaggacttatgcctttttttttatgaatagttttt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1788 tggactacttgtatgaaaaaggttgcaggacttatgcctttttttttatgaatagttttt 1847 Query: 325 tcccctcctttccccgacttcaattcaatatcccttccgcgactattctcttctctattt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1848 tcccctcctttccccgacttcaattcaatatcccttccgcgactattctcttctctattt 1907 Query: 385 tatttcgacggttaaattaagagtcaattatttctctagactctctctggttatggtttt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1908 tatttcgacggttaaattaagagtcaattatttctctagactctctctggttatggtttt 1967 Query: 445 agatagatcatcagttataactatatttttataatgtaaggaattatactttttcactaa 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1968 agatagatcatcagttataactatatttttataatgtaaggaattatactttttcactaa 2027 Query: 505 atttaactcaatcttctcttctctcatactttccaggtaataccactttatgactggaat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2028 atttaactcaatcttctcttctctcatactttccaggtaataccactttatgactggaat 2087 Query: 565 gacacaaagagccagtaattagccaaacatgaccacgtcaaaggaccccattacctgnga 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2088 gacacaaagagccagtaattagccaaacatgaccacgtcaaaggaccccattacctggga 2147 Query: 625 acagagtaaacattatatcaagaccggtgagttgtacaagttgatcccgtcaccgggaaa 684 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2148 acagagtaaacattatatcaagaccggtgagttgtacaagttgatccggtcaccggaaat 2207 Query: 685 tacggccaaatattcgc-agcatatatccgagctttgatctaaaggccaagatttggtct 743 |||||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||| Sbjct: 2208 tacggccaaata-tcgcaagcataaatccgagcttgaatctaaaggccaagatttggtct 2266 Query: 744 ccttttatcctcactttcagattacactgggatgtgaaagaattgaaacacttttataat 803 || ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 2267 cc-tttatcctcacttccagattacactgggatgtgaaagaattgaaccactttaataat 2325 Query: 804 atagcttttcgcctcgg 820 ||||| ||||||||||| Sbjct: 2326 atagc-tttcgcctcgg 2341 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6847 Number of Sequences: 1807 Number of extensions: 6847 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)