BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD04RM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig837 1610 0.0 >3x_Contig837 Length = 3290 Score = 1610 bits (812), Expect = 0.0 Identities = 838/845 (99%), Gaps = 2/845 (0%) Strand = Plus / Minus Query: 45 ttatttagtagcggcactgaaatacgttctcttccatcttcactggaaggcagtttccaa 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1916 ttatttagtagcggcactgaaatacgttctcttccatcttcactggaaggcagtttccaa 1857 Query: 105 gtgaaaattaccattctcatccttggcgaacactcctttctcagttataataccatcgat 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1856 gtgaaaattaccattctcatccttggcgaacactcctttctcagttataataccatcgat 1797 Query: 165 gtgagtatatggagtgatatcaaatgatggattccatactggcatatctaaaggtgtaat 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1796 gtgagtatatggagtgatatcaaatgatggattccatactggcatatctaaaggtgtaat 1737 Query: 225 tccaactttggccttcacgggagtcttggattcgttcaataccggagttgggtcagttcc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 tccaactttggccttcacgggagtcttggattcgttcaataccggagttgggtcagttcc 1677 Query: 285 gtcgattagagtaccttgaacaaatctgaactcatttggaggtctttcctcaaccactat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 gtcgattagagtaccttgaacaaatctgaactcatttggaggtctttcctcaaccactat 1617 Query: 345 cttgtccccagtttctgtattgctatcaaaagtagtagttggtgcgacaacgtaaaactt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 cttgtccccagtttctgtattgctatcaaaagtagtagttggtgcgacaacgtaaaactt 1557 Query: 405 gatcccaaagtgtctacagacgattgacaattggtaagtaccaatcttattggccgtgtc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1556 gatcccaaagtgtctacagacgattgacaattggtaagtaccaatcttattggccgtgtc 1497 Query: 465 accattcttaactattctatcagcaccaacgaatgcagctttgataggtatctttgatgt 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 accattcttaactattctatcagcaccaacgaatgcagctttgataggtatctttgatgt 1437 Query: 525 ggatactaggtatgaaatggatgagtctgtaatcaacgtggatggaatttcatcatgtaa 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1436 ggatactaggtatgaaatggatgagtctgtaatcaacgtggatggaatttcatcatgtaa 1377 Query: 585 caattcgtatgcagttaagcgggatccctggttgtaaggacgtgtttccaatgggaatac 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 caattcgtatgcagttaagcgggatccctggttgtaaggacgtgtttccaatgggaatac 1317 Query: 645 acgaaccattttggcattcgaagtcttcgtcctctttggttgttcatccccgctgatttg 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 acgaaccattttggcattcgaagtcttcgtcctctttggttgttcatccccgctgatttg 1257 Query: 705 cttctttgttctctcatataaagatctgatnacacctaacgctgtgccataccctngagt 764 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 1256 cttctttgttctctcatataaagatctgataacacctaacgctgtgccataccctgaggt 1197 Query: 765 agcaagtgaacctgtattgcanatcgtcaagactccaaaatctccttcgaaagcttcttt 824 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1196 agcaagtgaacctgtattgcaaatcgtcaagactccaaaatctccttcgaaagcttcttt 1137 Query: 825 ttccaactgccgct-acaaatgcttggcaccgttttctcccattgtgaaattgtctgcat 883 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 ttccaactg-cgctaacaaatgcttggcaccgttttctcccattgtgaaattgtctgcat 1078 Query: 884 aatcg 888 ||||| Sbjct: 1077 aatcg 1073 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5674 Number of Sequences: 1807 Number of extensions: 5674 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)