BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD06RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig415 761 0.0 >3x_Contig415 Length = 1171 Score = 761 bits (384), Expect = 0.0 Identities = 387/388 (99%) Strand = Plus / Plus Query: 48 tctgataattatcaaaatcattacccggatattagctttaatttcgacttctcttttaat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 tctgataattatcaaaatcattacccggatattagctttaatttcgacttctcttttaat 834 Query: 108 gtttgaagaaagtatataaagatttaaagtatcgttcgtttatgttttacagtacgttgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 gtttgaagaaagtatataaagatttaaagtatcgttcgtttatgttttacagtacgttgc 894 Query: 168 gtttggaatatgttgataattatatatagttgatgtaacatcagtctgactaggggaggc 227 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 895 gtttggaatatgttgataattatatatagttgatgtaacatcagtctgacgaggggaggc 954 Query: 228 agtcaaataaaaaaatgtagcgttagaaatgggaatgtaaatttttttatcctttcttca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 agtcaaataaaaaaatgtagcgttagaaatgggaatgtaaatttttttatcctttcttca 1014 Query: 288 tagagttttaatttcgtgatcaacaacatcaaccaaagtttcaagttccagtttggaacg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 tagagttttaatttcgtgatcaacaacatcaaccaaagtttcaagttccagtttggaacg 1074 Query: 348 agctgcttgtagccaatcgtcagcttctagtctagaccagccttgtagttgcacgacatc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 agctgcttgtagccaatcgtcagcttctagtctagaccagccttgtagttgcacgacatc 1134 Query: 408 ttcgactgccttgtcaagtctgttgagt 435 |||||||||||||||||||||||||||| Sbjct: 1135 ttcgactgccttgtcaagtctgttgagt 1162 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8726 Number of Sequences: 1807 Number of extensions: 8726 Number of successful extensions: 78 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)