BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC47ZD06RM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig415                                                          761   0.0  

>3x_Contig415 
          Length = 1171

 Score =  761 bits (384), Expect = 0.0
 Identities = 387/388 (99%)
 Strand = Plus / Plus

                                                                        
Query: 48   tctgataattatcaaaatcattacccggatattagctttaatttcgacttctcttttaat 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  tctgataattatcaaaatcattacccggatattagctttaatttcgacttctcttttaat 834

                                                                        
Query: 108  gtttgaagaaagtatataaagatttaaagtatcgttcgtttatgttttacagtacgttgc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  gtttgaagaaagtatataaagatttaaagtatcgttcgtttatgttttacagtacgttgc 894

                                                                        
Query: 168  gtttggaatatgttgataattatatatagttgatgtaacatcagtctgactaggggaggc 227
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 895  gtttggaatatgttgataattatatatagttgatgtaacatcagtctgacgaggggaggc 954

                                                                        
Query: 228  agtcaaataaaaaaatgtagcgttagaaatgggaatgtaaatttttttatcctttcttca 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  agtcaaataaaaaaatgtagcgttagaaatgggaatgtaaatttttttatcctttcttca 1014

                                                                        
Query: 288  tagagttttaatttcgtgatcaacaacatcaaccaaagtttcaagttccagtttggaacg 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 tagagttttaatttcgtgatcaacaacatcaaccaaagtttcaagttccagtttggaacg 1074

                                                                        
Query: 348  agctgcttgtagccaatcgtcagcttctagtctagaccagccttgtagttgcacgacatc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 agctgcttgtagccaatcgtcagcttctagtctagaccagccttgtagttgcacgacatc 1134

                                        
Query: 408  ttcgactgccttgtcaagtctgttgagt 435
            ||||||||||||||||||||||||||||
Sbjct: 1135 ttcgactgccttgtcaagtctgttgagt 1162


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8726
Number of Sequences: 1807
Number of extensions: 8726
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)