BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD09FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1679 1405 0.0 >3x_Contig1679 Length = 11609 Score = 1405 bits (709), Expect = 0.0 Identities = 776/791 (98%), Gaps = 6/791 (0%) Strand = Plus / Plus Query: 86 tattacggtacattttagtaatataataagtacaaaagaaataatatcaagataatatgg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3802 tattacggtacattttagtaatataataagtacaaaagaaataatatcaagataatatgg 3861 Query: 146 ttgaagattctaaggtcagagatgccatgaaaaatggtgagaagaaagtcttgccggcat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3862 ttgaagattctaaggtcagagatgccatgaaaaatggtgagaagaaagtcttgccggcat 3921 Query: 206 cattggtccctcaagctccgccagtgctaacatcgaaggacaaagttaccaagagactta 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3922 cattggtccctcaagctccgccagtgctaacatcgaaggacaaagttaccaagagactta 3981 Query: 266 ttgtggtgctatcccaggcttctttagagacacataaaatatcatccaacggtcctggtg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3982 ttgtggtgctatcccaggcttctttagagacacataaaatatcatccaacggtcctggtg 4041 Query: 326 gggataaatacgtcttgttgaattgtgatgatcatcaaggtttgttgaagaaaatgggaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4042 gggataaatacgtcttgttgaattgtgatgatcatcaaggtttgttgaagaaaatgggaa 4101 Query: 386 gagatataagcgaagctagacccgacattactcatcaatgtcttctaaccctattagatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4102 gagatataagcgaagctagacccgacattactcatcaatgtcttctaaccctattagatt 4161 Query: 446 ctcctgtaaataaggctggtaaacttcaagtttatattcagaccagtcgaggcgttctta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4162 ctcctgtaaataaggctggtaaacttcaagtttatattcagaccagtcgaggcgttctta 4221 Query: 506 tcgagttaaaccctactgtacgaattccaagaactttcaaacgtttctcaggtttaatgg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4222 tcgagttaaaccctactgtacgaattccaagaactttcaaacgtttctcaggtttaatgg 4281 Query: 566 tccaattattgcataaactatccatcagatcagttaactctgaagaaaaattgntgaagg 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4282 tccaattattgcataaactatccatcagatcagttaactctgaagaaaaattgttgaagg 4341 Query: 626 tcattaagaatccaattaccgaccacctaccaaccaaatgtcgtaaaatcaccttgtcct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4342 tcattaagaatccaattaccgaccacctaccaaccaaatgtcgtaaaatcaccttgtcct 4401 Query: 686 ncgatgcacctgtcataagaagtgc-agactacgtggaaaagttggatgatgatgaaagt 744 |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 4402 tcgatgcacctgtcataag-agtgcaagactacgtggaaaagttggatgatgatgaaagt 4460 Query: 745 atatgtgtgttttgtttgtgcccatggccaggggtaaagataaatttgcagatgaatttt 804 ||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||| ||| Sbjct: 4461 atatgtgtg-tttgttggtg-ccatggccaggggtaaagataattttgcagatgaa-ttt 4517 Query: 805 ggggatgaaaagattggtctattccaactttccattatctgcttcggttgcatgcctcca 864 | ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | | Sbjct: 4518 gtggatgaaaagattggtcta-tccaactatccattatctgcttcggttgcatgctccaa 4576 Query: 865 gttctgtcatg 875 ||||||||||| Sbjct: 4577 gttctgtcatg 4587 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7245 Number of Sequences: 1807 Number of extensions: 7245 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)