BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD10RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1227 1289 0.0 >3x_Contig1227 Length = 6330 Score = 1289 bits (650), Expect = 0.0 Identities = 730/750 (97%), Gaps = 5/750 (0%) Strand = Plus / Minus Query: 48 tttcttccattcaactaatctagcaaaatcttggttttctt-attacctgaatgggatac 106 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3374 tttcttccattcaactaatctagcaaaatcttggttttcttcattacctgaatgggatac 3315 Query: 107 gtcccaggatcctacagtcattaatccattcaaactaacatgcttggcctccttgataag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3314 gtcccaggatcctacagtcattaatccattcaaactaacatgcttggcctccttgataag 3255 Query: 167 atattcaacaatcgaatacacctctacttctgcgaacaatccggatttttgttcctctcc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3254 atattcaacaatcgaatacacctctacttctgcgaacaatccggatttttgttcctctcc 3195 Query: 227 agaagtgttgatctgaacattacacgtgatcacgggtgcatccgggttccacttccctct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 agaagtgttgatctgaacattacacgtgatcacgggtgcatccgggttccacttccctct 3135 Query: 287 ggcttcttccaacttcttcgccttctttaacgaatcaacggtctctaccgagtaaaggtt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3134 ggcttcttccaacttcttcgccttctttaacgaatcaacggtctctaccgagtaaaggtt 3075 Query: 347 cgcaatcttagccaaatccttgcatttgttactttgcaaaccgccgatgaaatgccattt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3074 cgcaatcttagccaaatccttgcatttgttactttgcaaaccgccgatgaaatgccattt 3015 Query: 407 aatatcctggggtaaaatctcactcttcgtaatcatctcttgaacgtagttttccccaaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3014 aatatcctggggtaaaatctcactcttcgtaatcatctcttgaacgtagttttccccaaa 2955 Query: 467 gtgtctcacaccataatcatacaaaattttgatgtctgcagcaggcttatacttggaaac 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2954 gtgtctcacaccataatcatacaaaattttgatgtctgcagcaggcttatacttggaaac 2895 Query: 527 agctagtaattcaacgttaacattaccgacttcctgagcagtggcattgatcttatcttt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2894 agctagtaattcaacgttaacattaccgacttcctgagcagtggcattgatcttatcttt 2835 Query: 587 catcgtctgataagccccaatcagctcttctttcctcacagcatcgtaactgatatcact 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2834 catcgtctgataagccccaatcagctcttctttcctcacagcatcgtaactgatatcact 2775 Query: 647 agacattcttcttgctactatcagtcccctgcggatcattc-aaagcactattatattgg 705 ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| || Sbjct: 2774 agacattcttcttgctactatcagtcccctgcgaatcattcaaaagcactataatatggg 2715 Query: 706 gtaaaccaaattttaaaagtagtgctcatcactttattcttatcagatggtgtgaattct 765 |||||||| |||||| |||||||||||| ||| |||||||||||| |||||| || Sbjct: 2714 taaaaccaaaatttaaagtaagtgctcatcac-ttaatcttatcagatgttgtgaa-tca 2657 Query: 766 ttgagcaaatttcttttatattttgaagcc 795 | ||||||| ||| ||||||| |||||||| Sbjct: 2656 tcgagcaaa-ttcctttatatcttgaagcc 2628 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6742 Number of Sequences: 1807 Number of extensions: 6742 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)