BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC47ZD11FM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig905                                                         1409   0.0  

>3x_Contig905 
          Length = 2723

 Score = 1409 bits (711), Expect = 0.0
 Identities = 720/723 (99%)
 Strand = Plus / Plus

                                                                        
Query: 88   agatttcaagtagtctataaaggctttccatgcttgttcatcattatcgttatatgaaca 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 agatttcaagtagtctataaaggctttccatgcttgttcatcattatcgttatatgaaca 2055

                                                                        
Query: 148  agtctgggcttttcctatatatatatattcctcgttcagaacaataggaatctgtttttc 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 agtctgggcttttcctatatatatatattcctcgttcagaacaataggaatctgtttttc 2115

                                                                        
Query: 208  tttgtcgacgtccatttgatcatcatcttcggtgtctgatattacaggctgatctaagat 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 tttgtcgacgtccatttgatcatcatcttcggtgtctgatattacaggctgatctaagat 2175

                                                                        
Query: 268  ctccttcaaagtgaattccggtataccagaatctctcaacatcatggaatctgtcatact 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 ctccttcaaagtgaattccggtataccagaatctctcaacatcatggaatctgtcatact 2235

                                                                        
Query: 328  tggcctcctattacttagcacgctggactttcttcttggttttggttgtacacttccaga 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 tggcctcctattacttagcacgctggactttcttcttggttttggttgtacacttccaga 2295

                                                                        
Query: 388  gttcgaggtcgagatgctactggtaacgttgtcatgaataattaattttaaaacttcttg 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 gttcgaggtcgagatgctactggtaacgttgtcatgaataattaattttaaaacttcttg 2355

                                                                        
Query: 448  gagaactattttatgccaattgtaccacttcaaaaaatctggcaacaatgctatatcttc 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 gagaactattttatgccaattgtaccacttcaaaaaatctggcaacaatgctatatcttc 2415

                                                                        
Query: 508  attggatatcctaaacgaatccataagtaacagatctgatgtgagttcattctgtagttt 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 attggatatcctaaacgaatccataagtaacagatctgatgtgagttcattctgtagttt 2475

                                                                        
Query: 568  aactgtatgtttcaaatgcgattgttgtggtagttcaaacttttttggagtttcattcat 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 aactgtatgtttcaaatgcgattgttgtggtagttcaaacttttttggagtttcattcat 2535

                                                                        
Query: 628  ctgtatctcggtggtaagccacgtttctgggaacgctactagttcttcaaatttgaatac 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 ctgtatctcggtggtaagccacgtttctgggaacgctactagttcttcaaatttgaatac 2595

                                                                        
Query: 688  gagattaattccttgcgtagatgcatcagatgattcgttaagccagtcttttagtttaga 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 gagattaattccttgcgtagatgcatcagatgattcgttaagccagtcttttagtttaga 2655

                                                                        
Query: 748  gtcatacacatattcataaaaagatctatccgaattaggagctttttcccaattcacagt 807
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||
Sbjct: 2656 gtcatacacatattcataaaaagatctatccgaattaggagatttttccaaatccacagt 2715

               
Query: 808  cat 810
            |||
Sbjct: 2716 cat 2718


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9938
Number of Sequences: 1807
Number of extensions: 9938
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)