BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD11RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1541 1110 0.0 >3x_Contig1541 Length = 10565 Score = 1110 bits (560), Expect = 0.0 Identities = 594/600 (99%), Gaps = 4/600 (0%) Strand = Plus / Plus Query: 320 cagtctcagtccaatccagtccaagccaaccaatgttccagcgtagaactcgtttactat 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cagtctcagtccaatccagtccaagccaaccaatgttccagcgtagaactcgtttactat 60 Query: 380 aagttgtctgagtgctctctagtagcagtagcagcagcaaaaatgaaaacaagaaaagcc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagttgtctgagtgctctctagtagcagtagcagcagcaaaaatgaaaacaagaaaagcc 120 Query: 440 ttctgttaggccaaattaaccactaatatttctgattatggaaatcaagttaatacgacg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttctgttaggccaaattaaccactaatatttctgattatggaaatcaagttaatacgacg 180 Query: 500 gacgacataattattgggtaatgttccttatgttcggtgagtgaaaaaaaaaaaaaagaa 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gacgacataattattgggtaatgttccttatgttcggtgagtgaaaaaaaaaaaaaagaa 240 Query: 560 gtgtcgaaggaaactttaatggacgggatgggatattcagtggttgagagtgtacgtttg 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgtcgaaggaaactttaatggacgggatgggatattcagtggttgagagtgtacgtttg 300 Query: 620 taccatttctttcgaggtataaaaggcccagggggaaatcaatatcttgccagtcttttt 679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 taccatttctttcgaggtataaaaggcccagggggaaatcaatatcttgccagtcttttt 360 Query: 680 tgtttgttccttcgatgcgtttgttaccatctttagtcttcttactcattttattatcaa 739 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 361 tgtttgttccttcgatgcgtttgttaccatc-ttagtcttcttactcattttattatcaa 419 Query: 740 aagctcaagctattcgattctcaggtgtctcagaaattgattttttttctttgtgagcgt 799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aagctcaagctattcgattctcaggtgtctcagaaattgattttttttctttgtgagcgt 479 Query: 800 gcttagctaataatcccat-aaaggaccatattatcaag-atggctacgattcttcacaa 857 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 480 gcttagctaataatcccataaaagaaccatattatcaagaatggctacgattctccacaa 539 Query: 858 acagatttggaaca-caagttcaagcagctgatgacagctctaaaactcaacaagagact 916 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 acagatttggaacagcaagttcaagcagctgatgacagctctaaaactcaacaagagact 599 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,139 Number of Sequences: 1807 Number of extensions: 17139 Number of successful extensions: 397 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)