BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZD12RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1805 1518 0.0 >3x_Contig1805 Length = 19369 Score = 1518 bits (766), Expect = 0.0 Identities = 854/873 (97%), Gaps = 8/873 (0%) Strand = Plus / Minus Query: 48 ccagaacgaagattgtcagttaacttacatctgtaacatttccaacgcgtgttttcattg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3311 ccagaacgaagattgtcagttaacttacatctgtaacatttccaacgcgtgttttcattg 3252 Query: 108 catgttatcggattcgttatcaatgcattcaaacatatgccacagtcaagtgtcagcttc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3251 catgttatcggattcgttatcaatgcattcaaacatatgccacagtcaagtgtcagcttc 3192 Query: 168 tacaggtttgagagaacattgtgaacgcatggtcgtttgcaccacagtttatagaattgt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3191 tacaggtttgagagaacattgtgaacgcatggtcgtttgcaccacagtttatagaattgt 3132 Query: 228 tcatgtctacgtgtgtataatgtcggaaggatttcctattggcctctgaaaaccagtttc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3131 tcatgtctacgtgtgtataatgtcggaaggatttcctattggcctctgaaaaccagtttc 3072 Query: 288 actttccgttgatttgtttctaaacgttttccagaaaagagacaaataaaggctgaattg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3071 actttccgttgatttgtttctaaacgttttccagaaaagagacaaataaaggctgaattg 3012 Query: 348 cgatgcatgcctgttctggtatctgatagggatccataaaagctgtgataacttgtttca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3011 cgatgcatgcctgttctggtatctgatagggatccataaaagctgtgataacttgtttca 2952 Query: 408 aagcacatttgtaaagcaatttccaggctcaagacaaacggtccatcattcgaacttcag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2951 aagcacatttgtaaagcaatttccaggctcaagacaaacggtccatcattcgaacttcag 2892 Query: 468 ctctatatagtttcatgggattgggaagagggtgtttctagtgaatagtttaagagagta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2891 ctctatatagtttcatgggattgggaagagggtgtttctagtgaatagtttaagagagta 2832 Query: 528 cgaatctggaacagtaacatcaaaacggtaagctcgcctggaaatatactacaggcggtt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2831 cgaatctggaacagtaacatcaaaacggtaagctcgcctggaaatatactacaggcggtt 2772 Query: 588 tctttacgattcgtgaaactgtctacgaactcagcgtttggtggctggttgaacaganaa 647 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2771 tctttacgattcgtgaaactgtctacgaactcagcgtttggtggctggttgaacagaaaa 2712 Query: 648 aaacaccgatagcataataacttagttgaaaattgctttatcatcctaacgagtaccctg 707 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2711 aaacaccgatagcataataacttagttgaaaattgctttatcatcctaacgagta-cctg 2653 Query: 708 aaaattc-agaaaagtagttacaacctcatcattccttattccattcggcatcataccat 766 ||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 2652 aaaatccaagaaaagtagtaacaacctcatcattccttattccattcgcaatcataccat 2593 Query: 767 tttgatttttcagaat-aaaaatacaaaatggacatgacggcccaagacg-aaaactggt 824 ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2592 tttgattttcaagaataaaaaatacaaaatggacatgacggcccaagacgaaaaactggt 2533 Query: 825 tcacgaggaacaagtttaacaatgttc-atagcacttatttccttttcttg-tagtacca 882 |||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 2532 ccacgaggaacaagtataacaatgttcaatagcacttatttccttttcctgctagtacca 2473 Query: 883 agttcttac-tgaagaccac-gaacaatgcttt 913 |||||| || |||||||||| |||||||||||| Sbjct: 2472 agttctcacatgaagaccacagaacaatgcttt 2440 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6047 Number of Sequences: 1807 Number of extensions: 6047 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)