BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZE03RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig948 1513 0.0 >3x_Contig948 Length = 3578 Score = 1513 bits (763), Expect = 0.0 Identities = 864/890 (97%), Gaps = 6/890 (0%) Strand = Plus / Minus Query: 48 atagaaacttcctcctgaattttgactctgaagtcaccagaaccatttaaattcggtaca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 atagaaacttcctcctgaattttgactctgaagtcaccagaaccatttaaattcggtaca 1012 Query: 108 aggtttggtccgcataatttcgtctcgacgtgtttcttgggtcttcccctcggtttcttc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 aggtttggtccgcataatttcgtctcgacgtgtttcttgggtcttcccctcggtttcttc 952 Query: 168 accaaatttaccttatgttgtttgatatcacatttattattcgaatgtatcaatttacta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 accaaatttaccttatgttgtttgatatcacatttattattcgaatgtatcaatttacta 892 Query: 228 tactgtcgcaaatccataccaacagaggtgttagggttgagattagcacctgtcttagac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 tactgtcgcaaatccataccaacagaggtgttagggttgagattagcacctgtcttagac 832 Query: 288 attatcaatgtcagtataaccttaaaagtacccctgtttttttacgtcgaaataagatgc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 attatcaatgtcagtataaccttaaaagtacccctgtttttttacgtcgaaataagatgc 772 Query: 348 tgaatagcaacaaaggaccctggaaaaatatcaatcaattaaattcaagattaataatgt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 tgaatagcaacaaaggaccctggaaaaatatcaatcaattaaattcaagattaataatgt 712 Query: 408 atttcaccttggatttcagatcaaagacgttaccagttgctgttaacgcgctctattctt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 atttcaccttggatttcagatcaaagacgttaccagttgctgttaacgcgctctattctt 652 Query: 468 gaatattttgtatctaatcatcgtgtttttttaagatgaatcattttcgtttttaagtaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 gaatattttgtatctaatcatcgtgtttttttaagatgaatcattttcgtttttaagtaa 592 Query: 528 gtgtgaaagatatatgtccgtcagcaaaaaggcctaattgagtaattacaaggacaccaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 gtgtgaaagatatatgtccgtcagcaaaaaggcctaattgagtaattacaaggacaccaa 532 Query: 588 gtgagatataacaaagagatttgggtagatgagggatgagggatttgacggtgntaaagt 647 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 531 gtgagatataacaaagagatttgggtagatgagggatgagggatttgacggtgtaaagtt 472 Query: 648 gaatgtatggatgtattttgggcttgatatttcaatactttaccttttgcgtgaaattct 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gaatgtatggatgtattttgggcttgatatttcaatactttaccttttgcgtgaaattct 412 Query: 708 actgtggagtgaggtgacattgcacttttgccgaagcgtaatacacaatcacctggcttt 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 actgtggagtgaggtgacattgcacttttgccgaagcgtaatacacaatcacctggcttt 352 Query: 768 catagactgacgtgtgtacaattatttattgactac-taaaccat-aaggatgtgatgca 825 ||||||||||||||||||| |||||| ||||||||| ||||| || |||||||||||||| Sbjct: 351 catagactgacgtgtgtaccattattaattgactacttaaacaataaaggatgtgatgca 292 Query: 826 aaaaagtcgacctggataattttt-atccaagcctatttttgaaaccttcg-aagaaaac 883 || | ||||| ||||||||||||| |||||||| ||| | ||||| || || |||||| | Sbjct: 291 aagaggtcgagctggataatttttaatccaagcatatatatgaaaactccgaaagaaacc 232 Query: 884 tgcccaat-aaatgtcgacccgttccatagtataat-ggcgttaaacctg 931 |||||||| |||||||||| ||| | |||||||||| ||||| ||||||| Sbjct: 231 tgcccaataaaatgtcgacgcgtacaatagtataataggcgtaaaacctg 182 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6497 Number of Sequences: 1807 Number of extensions: 6497 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)