BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZE08RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1603 1370 0.0 >3x_Contig1603 Length = 12146 Score = 1370 bits (691), Expect = 0.0 Identities = 768/783 (98%), Gaps = 8/783 (1%) Strand = Plus / Minus Query: 48 atgaaaatctaaaaagtttgtccactgacatagctaagaaagaaaaagagatagtagaat 107 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 3998 atgaaaatctaaaaagtttgtccactgacatagctaagaaagacaaagagatagtagaat 3939 Query: 108 cacgccacgtaacagatcatttgaaaactcagcgctatgagcttgggaaaagttctcgac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3938 cacgccacgtaacagatcatttgaaaactcagcgctatgagcttgggaaaagttctcgac 3879 Query: 168 tcttgcagcaatatgatgtcaagatcagtagatatcgccagaaagtcaacgacaacaatg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3878 tcttgcagcaatatgatgtcaagatcagtagatatcgccagaaagtcaacgacaacaatg 3819 Query: 228 aaaagctaagagtagatataagagacagcataaaagaagccagtaacaagttacaagagg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3818 aaaagctaagagtagatataagagacagcataaaagaagccagtaacaagttacaagagg 3759 Query: 288 cacgcgagagcgagaggaaagctttacttcgtttacaccccataaccatacagatgcaag 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3758 cacgcgagagcgagaggaaagctttacttcgtttacaccccataaccatacagatgcaag 3699 Query: 348 aatttgatatcgagatggcgacaaagaatatgtatctcctggaattacgtacgaaaattg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3698 aatttgatatcgagatggcgacaaagaatatgtatctcctggaattacgtacgaaaattg 3639 Query: 408 attccatatcacaggtgtgcaggtctatggaagaagcgcgcaatttgaaaaaagaagagt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3638 attccatatcacaggtgtgcaggtctatggaagaagcgcgcaatttgaaaaaagaagagt 3579 Query: 468 tcatcgatgtttctgagcaatacaaaagtatcaaaaacacagatgagtttataaagtgct 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3578 tcatcgatgtttctgagcaatacaaaagtatcaaaaacacagatgagtttataaagtgct 3519 Query: 528 cgaatgcaatcgagaacttcccagaagaggaaaaggatgttctcaacgaaattgcggtaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3518 cgaatgcaatcgagaacttcccagaagaggaaaaggatgttctcaacgaaattgcggtaa 3459 Query: 588 aatataatcaagaaaatcaattcagctcgattcatatcgaaagta-tataaataggcttt 646 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3458 aatataatcaagaaaatcaattcagctcgattcatatcgaaagtattataaataggcttt 3399 Query: 647 caagtgaactctctatgatcaacaacgacacttctgtcattgacattcttaaaaaaacca 706 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3398 caagtgaactctctatgatcaacaacgacacttctgtcattgacattctaaaaaaaacca 3339 Query: 707 accgagatatatctatactggagaaaactctttctcatctacgagccaaggctcgcatct 766 || |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 3338 acgaagatatatctatactggagaaaactcttcctcatctacgagccaa-gctcgcatct 3280 Query: 767 aatggctc-aacaatacttggaaataaggaaacttccttagagcctagggtgggatgata 825 ||| |||| |||||||||| ||||||| ||||| ||| ||||||||| ||| |||||||| Sbjct: 3279 aat-gctcaaacaatactt-gaaataa-gaaac-tccctagagccta-ggttggatgata 3225 Query: 826 ttg 828 ||| Sbjct: 3224 ttg 3222 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7934 Number of Sequences: 1807 Number of extensions: 7934 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)