BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZE10RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 965 0.0 >3x_Contig1575 Length = 11952 Score = 965 bits (487), Expect = 0.0 Identities = 521/530 (98%), Gaps = 2/530 (0%) Strand = Plus / Plus Query: 47 cagacttgaagattcctgtttatgataccttcaacggtaaggacttgagggaatctaaag 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8071 cagacttgaagattcctgtttatgataccttcaacggtaaggacttgagggaatctaaag 8130 Query: 107 agccaattgcttcgaggatcacctattgtattactagcttacctgtgaactgggaagaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8131 agccaattgcttcgaggatcacctattgtattactagcttacctgtgaactgggaagaat 8190 Query: 167 ccaccaaattcaatgctactcacattcttgatttcggtcctggtggagcttccggtttag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8191 ccaccaaattcaatgctactcacattcttgatttcggtcctggtggagcttccggtttag 8250 Query: 227 gtgttttgactcatcgtaacaaagatggtactggtgtacgtgtcattatagctggtgctt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8251 gtgttttgactcatcgtaacaaagatggtactggtgtacgtgtcattatagctggtgctt 8310 Query: 287 tggacactaacccagatgatgagtacggtttcaaacaagaattattcgatgttaccagct 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8311 tggacactaacccagatgatgagtacggtttcaaacaagaattattcgatgttaccagct 8370 Query: 347 ccggtttgaaattctccgttaactggttagaacaattccatccaaagttagtcaagacaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8371 ccggtttgaaattctccgttaactggttagaacaattccatccaaagttagtcaagacaa 8430 Query: 407 aggctggtaagatttacgttgataccacattctctaaattattaggtagagctccattat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8431 aggctggtaagatttacgttgataccacattctctaaattattaggtagagctccattat 8490 Query: 467 tggttncaggtatgactccaactactgtatcaccagactttgttgctggcaccaattaa- 525 ||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 8491 tggttccaggtatgactccaactactgtatcaccagactttgttgctgcca-caattaat 8549 Query: 526 gctggttaccttattgaataacctggtggtgggtatttcactgcttaagg 575 |||||||||| |||||||| | |||||||||| |||||||||||| |||| Sbjct: 8550 gctggttaccatattgaattagctggtggtggttatttcactgctgaagg 8599 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7317 Number of Sequences: 1807 Number of extensions: 7317 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)