BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZF03FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1511 1251 0.0 >3x_Contig1511 Length = 8569 Score = 1251 bits (631), Expect = 0.0 Identities = 703/723 (97%), Gaps = 3/723 (0%) Strand = Plus / Plus Query: 87 ctcgtaacattgaatcaaagtggcctggataaatttcggtgcgttggcatggacgtattc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7394 ctcgtaacattgaatcaaagtggcctggataaatttcggtgcgttggcatggacgtattc 7453 Query: 147 agaggattcacttgcttgctttataatagatagtagatattccttggagtatttgtccga 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7454 agaggattcacttgcttgctttataatagatagtagatattccttggagtatttgtccga 7513 Query: 207 ttcgaatttcatgacagaatcaaacaatgatccagagagcttgtttctgaacaaagcagc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7514 ttcgaatttcatgacagaatcaaacaatgatccagagagcttgtttctgaacaaagcagc 7573 Query: 267 gcctacggacacaccaagtgtactaccagttgatctgaaagcgtaggaaattgacgtggt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7574 gcctacggacacaccaagtgtactaccagttgatctgaaagcgtaggaaattgacgtggt 7633 Query: 327 agcggcttggtgttcatgtggaaccgctgcaatcatggcaagaagtgtaaccgttatcaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7634 agcggcttggtgttcatgtggaaccgctgcaatcatggcaagaagtgtaaccgttatcaa 7693 Query: 387 gacagaagatccaaagtgaggtaatgggagcaagatgtactgtctccatgtgctgatatc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7694 gacagaagatccaaagtgaggtaatgggagcaagatgtactgtctccatgtgctgatatc 7753 Query: 447 gggcttcattagcaacacttgtagttgcccaaggaccattagaccggtaaatttcaatag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7754 gggcttcattagcaacacttgtagttgcccaaggaccattagaccggtaaatttcaatag 7813 Query: 507 gaacccgtagtaacggccagtctttttcatgtagtatccagctccgattgaaccgaacgc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7814 gaacccgtagtaacggccagtctttttcatgtagtatccagctccgattgaaccgaacgc 7873 Query: 567 agtactgaagaaatttggtgctatacgtttacccatatctgtaggcttgagattctgaac 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7874 agtactgaagaaatttggtgctatacgtttacccatatctgtaggcttgagattctgaac 7933 Query: 627 gctggaccaataaacaggttcatagaacgctagagtgacaccactcatcatacagaacca 686 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 7934 gctggaccaataaacaggtacatagaacgctagagtgacaccactcatcatacagaacca 7993 Query: 687 atttccgaaagattgcgcc-agtttacttttggttttcaaaaatttgatcggcaagatgg 745 ||| ||||||| |||||| ||| ||||| || | |||||||| ||||||||||||| | Sbjct: 7994 attcgcgaaaga-tgcgccaagtatacttctgttagtcaaaaatctgatcggcaagat-g 8051 Query: 746 ggatcatttgagatgttaaacttaacgtaaatgaaagccgttcctgataaaaaaggtgct 805 ||||||| |||||||| | || ||||||||||||||| ||||||||||||| || |||| Sbjct: 8052 ggatcatctgagatgtagagctcaacgtaaatgaaagcagttcctgataaaatagttgct 8111 Query: 806 act 808 ||| Sbjct: 8112 act 8114 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5780 Number of Sequences: 1807 Number of extensions: 5780 Number of successful extensions: 32 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)