BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC47ZF03FM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1511                                                        1251   0.0  

>3x_Contig1511 
          Length = 8569

 Score = 1251 bits (631), Expect = 0.0
 Identities = 703/723 (97%), Gaps = 3/723 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   ctcgtaacattgaatcaaagtggcctggataaatttcggtgcgttggcatggacgtattc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7394 ctcgtaacattgaatcaaagtggcctggataaatttcggtgcgttggcatggacgtattc 7453

                                                                        
Query: 147  agaggattcacttgcttgctttataatagatagtagatattccttggagtatttgtccga 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7454 agaggattcacttgcttgctttataatagatagtagatattccttggagtatttgtccga 7513

                                                                        
Query: 207  ttcgaatttcatgacagaatcaaacaatgatccagagagcttgtttctgaacaaagcagc 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7514 ttcgaatttcatgacagaatcaaacaatgatccagagagcttgtttctgaacaaagcagc 7573

                                                                        
Query: 267  gcctacggacacaccaagtgtactaccagttgatctgaaagcgtaggaaattgacgtggt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7574 gcctacggacacaccaagtgtactaccagttgatctgaaagcgtaggaaattgacgtggt 7633

                                                                        
Query: 327  agcggcttggtgttcatgtggaaccgctgcaatcatggcaagaagtgtaaccgttatcaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7634 agcggcttggtgttcatgtggaaccgctgcaatcatggcaagaagtgtaaccgttatcaa 7693

                                                                        
Query: 387  gacagaagatccaaagtgaggtaatgggagcaagatgtactgtctccatgtgctgatatc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7694 gacagaagatccaaagtgaggtaatgggagcaagatgtactgtctccatgtgctgatatc 7753

                                                                        
Query: 447  gggcttcattagcaacacttgtagttgcccaaggaccattagaccggtaaatttcaatag 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7754 gggcttcattagcaacacttgtagttgcccaaggaccattagaccggtaaatttcaatag 7813

                                                                        
Query: 507  gaacccgtagtaacggccagtctttttcatgtagtatccagctccgattgaaccgaacgc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7814 gaacccgtagtaacggccagtctttttcatgtagtatccagctccgattgaaccgaacgc 7873

                                                                        
Query: 567  agtactgaagaaatttggtgctatacgtttacccatatctgtaggcttgagattctgaac 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7874 agtactgaagaaatttggtgctatacgtttacccatatctgtaggcttgagattctgaac 7933

                                                                        
Query: 627  gctggaccaataaacaggttcatagaacgctagagtgacaccactcatcatacagaacca 686
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 7934 gctggaccaataaacaggtacatagaacgctagagtgacaccactcatcatacagaacca 7993

                                                                        
Query: 687  atttccgaaagattgcgcc-agtttacttttggttttcaaaaatttgatcggcaagatgg 745
            |||  ||||||| |||||| ||| ||||| || |  |||||||| ||||||||||||| |
Sbjct: 7994 attcgcgaaaga-tgcgccaagtatacttctgttagtcaaaaatctgatcggcaagat-g 8051

                                                                        
Query: 746  ggatcatttgagatgttaaacttaacgtaaatgaaagccgttcctgataaaaaaggtgct 805
            ||||||| ||||||||  | || ||||||||||||||| ||||||||||||| || ||||
Sbjct: 8052 ggatcatctgagatgtagagctcaacgtaaatgaaagcagttcctgataaaatagttgct 8111

               
Query: 806  act 808
            |||
Sbjct: 8112 act 8114


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5780
Number of Sequences: 1807
Number of extensions: 5780
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)