BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZF08FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1428 1152 0.0 >3x_Contig1428 Length = 9146 Score = 1152 bits (581), Expect = 0.0 Identities = 716/746 (95%), Gaps = 14/746 (1%) Strand = Plus / Minus Query: 86 accagtacttaattcgtcatacgtatgtaaatataccaaatt-caggcagaaccagttgc 144 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 8994 accagtacttaattcgtcatacgtatgtaaatataccaaaatacaggcagaaccagttgc 8935 Query: 145 catttaaattagcagttgtaaacctcaataactttctttacctaaattccgttgttgcat 204 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8934 catttaaattagcagttgtaaacctcaatcactttctttacctaaattccgttgttgcat 8875 Query: 205 cgcagcgttctttacctaaacaattaacttttcacgtccagctccatgactttaatgaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8874 cgcagcgttctttacctaaacaattaacttttcacgtccagctccatgactttaatgaaa 8815 Query: 265 aattgtgtgaaatatagggaaaagatatatcaactgatctcattgcaactttttttttaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8814 aattgtgtgaaatatagggaaaagatatatcaactgatctcattgcaactttttttttaa 8755 Query: 325 acgtagaccagaataacaggaataacgctcaatcagcacatctaagaatccttagcggag 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8754 acgtagaccagaataacaggaataacgctcaatcagcacatctaagaatccttagcggag 8695 Query: 385 tcgctacagctgaaatataattcgtatagacgttagcgtcaagaaatagtagatacacaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8694 tcgctacagctgaaatataattcgtatagacgttagcgtcaagaaatagtagatacacaa 8635 Query: 445 tat-aaattgacaagcaatggtttcattgacaaagagagtattatttgaagttattccga 503 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8634 tatcaaattgacaagcaatggtttcattgacaaagagagtattatttgaagttattccga 8575 Query: 504 atccacctgatgagacgactttgactttatcctctaccaccaacaaaggtcactacatat 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8574 atccacctgatgagacgactttgactttatcctctaccaccaacaaaggtcactacatat 8515 Query: 564 ccgttagacctttcgtcaatgctgaaggtaaggaattcccattttgatgggctttttgtg 623 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 8514 ccgttagacctttcgtcaatgctgaaggtaaggaattcccatttgaatgggcttttggtg 8455 Query: 624 gtacatctgatcacattgaattgaaaaaaatcaatgagagagccaacttctttaaacttc 683 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 8454 gtacatctgatcacattgaattgaaaaaaatcaatgagagagccaactcctt-aaacttc 8396 Query: 684 atttntaagttcgatacaaatgttgaagttgaatggtcccagaaactcatcgtgggtgtt 743 | || |||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| Sbjct: 8395 aattttaagttcgatacaaatgt-gaagttgaatgttcc-agaaactcatcgtgg-tgtt 8339 Query: 744 tattaaaaacggtctttaagacttgtggatttcggttttggttgaaagaaactggtttct 803 | ||||| ||||| |||||||| ||||| |||||| ||||||| |||||||||| Sbjct: 8338 a--tcaaaaccgtcttcaagacttg-ggattccggttt-ggttgaa-gaaactggttc-- 8286 Query: 804 tgtttttccattggggaaccgaaggt 829 |||||| |||| |||||||||||||| Sbjct: 8285 tgttttcccat-ggggaaccgaaggt 8261 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7436 Number of Sequences: 1807 Number of extensions: 7436 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)