BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC47ZF09RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1617 1065 0.0 >3x_Contig1617 Length = 15119 Score = 1065 bits (537), Expect = 0.0 Identities = 606/624 (97%), Gaps = 4/624 (0%) Strand = Plus / Plus Query: 48 aggtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattga 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 aggtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattga 91 Query: 108 ttcaaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 ttcaaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatc 151 Query: 168 tgagaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 tgagaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctt 211 Query: 228 ttcagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 ttcagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtc 271 Query: 288 gctatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 gctatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgta 331 Query: 348 ttctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 ttctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatc 391 Query: 408 aatctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 aatctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttc 451 Query: 468 ttcagcaatcactttttgtagatcaactttaccaattggttttcaggaaagaag-atttg 526 |||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| Sbjct: 452 ttcagcaatcactttttgtagatcaactttaccaattggtttccagg-aagaagaatttg 510 Query: 527 gttctagtgttttcttgtcgaaatcacgttcttcc-actcttgttaaccccattcatcgn 585 ||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||| Sbjct: 511 gttctagtggtttcttgtcgaaatcacgttcttccaactctggttcaccccattcatcgt 570 Query: 586 ccttcttacctttgctcttcttaagtctttgggggagaaacggatcttttttaaggggac 645 ||||||||||| |||||||| | ||||||||||||||||||||||||| || | ||| || Sbjct: 571 ccttcttacctctgctcttc-tcagtctttgggggagaaacggatcttcttgatgggaac 629 Query: 646 catgggggaggttccttttgctca 669 |||| | |||||||||||||||| Sbjct: 630 gatggtgtaggttccttttgctca 653 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8751 Number of Sequences: 1807 Number of extensions: 8751 Number of successful extensions: 153 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)